Gene Cthe_2575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_2575 
Symbol 
ID4809182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp3047311 
End bp3048321 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content43% 
IMG OID640107989 
Producthypothetical protein 
Protein accessionYP_001038968 
Protein GI125975058 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.225151 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA CCATGAAAAA AGCTGCTTTG ATTTTGATTG CGGCGGCGAT GTTAATGATG 
TCCTTTGCGG GCTGCGCCGA AAGGGATTAT ACTACTGTGA GGCTGAATGA AGTTACCCGT
TCGGTGTTTT ATGCTCCCCA GTATGTTGCG TTAAACTTGG GTTTCTTTGA GGAAGAAGGA
CTTAAAATTG ACATTGCAAG CGGTCAGGGT GCTGACAAGG TAATGACAGC GGTTTTGTCC
GGGCAGGCGG ATATAGGTTT TTCCGGACCA GAAGCTGCCA TATATGTGTA CAATGAAGGC
AGGGAAGACT ATGCCGTTGT GTTTGCACAG CTTACAAAAC GTGACGGTTC GTTTTTGGTG
GGAAGAAAAC CGGAACCGGA TTTTAAATGG GAAAACCTCA AAGGAAAGAC GATAATAGGC
GGAAGAAAAG GCGGAGTTCC CGAAATGACT CTTGAGTATG TGCTGAAGAA AAACAACCTG
ATACCGGGAG TTGATGTATA TATTGATACA AGTGTTCAGT TTGCTTTAAT GGCAGGGGCG
TTTACGGGAG GACAGGGTGA CTATGTTACG CTGTTTGAAC CGGTGGCTTC CACAGTGGAA
AAGGAAGGCA AGGGATATAT AATTACATCC ATAGGTAAAG AAAGCGGTGA GATTCCTTAT
ACAGCATATT ATGCAAGCAA GAGCTACATA GAAAAAAACA AAGACATAAT CCAGAAATTT
ACCAACGCCA TTTACAAAGG CCAGAAGTGG GTTGAAACTC ACACACCGGA GGAAATAGCG
GATGTTATAA AACCTTCTTT CCCCGATTCG GATAAGGAGA CACTGATAAC GGTGGCAAAG
AGATACAAGG AAACGGATGT ATGGAACAAA GACCCTATAT TGAAAAAAGA ATCCCTTGAC
CTTCTTCAGG AAGTAATGAG CATGGCAGGG GAACTTAAAA AAGAAGCGCC TTATGAAAAA
ATAGTAACAA AAGAGTTTGC CGAAAAAGCT ATGGAGAACT TTGAGAACTA A
 
Protein sequence
MKKTMKKAAL ILIAAAMLMM SFAGCAERDY TTVRLNEVTR SVFYAPQYVA LNLGFFEEEG 
LKIDIASGQG ADKVMTAVLS GQADIGFSGP EAAIYVYNEG REDYAVVFAQ LTKRDGSFLV
GRKPEPDFKW ENLKGKTIIG GRKGGVPEMT LEYVLKKNNL IPGVDVYIDT SVQFALMAGA
FTGGQGDYVT LFEPVASTVE KEGKGYIITS IGKESGEIPY TAYYASKSYI EKNKDIIQKF
TNAIYKGQKW VETHTPEEIA DVIKPSFPDS DKETLITVAK RYKETDVWNK DPILKKESLD
LLQEVMSMAG ELKKEAPYEK IVTKEFAEKA MENFEN