| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2504 |
|---|
| Symbol | |
|---|
| ID | 4809443 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | - |
|---|
| Start bp | 2970199 |
|---|
| End bp | 2971488 |
|---|
| Gene Length | 1290 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640107920 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001038899 |
|---|
| Protein GI | 125974989 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3584] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGAAATCA ACATTAATTC AGTGTTTGAA GAATTAAAAA ATCGGGAAAT TCTTACCCAA
AAAAATGTAT CCGACATAAA GAACTATATT TCAGTCCGTT ATCCAAATCA TTCCCCGCAA
AAAAAAGCCG CAATTTTTGC AGATGCGGTA AACAAGATAA TTAACAAAAA CATATCCTCA
ATAAGCATAA CTTACAGAGA CGGAATAAGA AAGACCCTCC TTAGGGAAAC AGTAAAAAAA
ACCCCTTTTG CAATTAATGC AAATGACGTT TATCATGCAT GTGTGAACAG TGGCTTTAAA
GAAGACAACT TCATAAATGA AGTTTCCCAA TGGTGCGGGA ATATATTGGA AAACCCTCAC
ATAAAAGATG CTGTCAAAGA TTACACATTA AAATTAATCA GTCTCGCAGA AACTCCCTCT
ACAATAGATG ATACAGTAAA TAATTCAATA AACGATACGA AATGTGAACC CTTAAGTCAT
GACAGGGACA CAGAACTTTT GCCGGAAAAT GTATCCGGGC AAGATGTTAA AATGCCAGAT
GCTGAAGTAA TCGAAGAAAT TTCCGTTTCA GATGACACTC CTGTTGAGTC TGAGTATGTA
AGCAGCATCG AACTTGATGC TGCAAGCAAT ATACCTGATA CAGGCAGTAC ACTCGGTACA
CATGAAACCG GCAGTATAAA AAGCGTCCCT GGTATAAAAA AAATTGTGAT TGCTGCCTCG
GCATTAGTTT TGATTATTAC ATTTTTCTCC GTTGCTTTGT CCGGCAAACT GAAAAAAACG
GCCGGCACCG TACAGCCAAG TGCCCCGGAA GCAACTCCTT CCCCTTCATA TGTCAGCATT
TTCAATAGCC TGAACACCCC GGACGACTTA TATCTGAAAA AAGCCATCTT ATCCAACCTG
GGCTACTCCA TGGGAATTCA CAGAAATGTT CCCAAACATA AAAAAGTAAT GTATCTTACG
GCCACAGCGT ACGACCTTTC TTATGAAAGC TGCGGCAAAA CCCGGGACCA CCCGGAGTAC
GGAATTACAT ACACCGGTAC AAGGGCCAAA TTGGGAAGAA CGGTTGCCGT TGACCCTTCG
GTAATTCCCC TGGGAAGTGA AATGTACATA ATATTTCCTG AAGAATACAG CCACTTAAAC
GGAGTTTATA TTGCGGAAGA CACCGGTTCT CTTATCAAAG GCAATAAAAT TGATATATTT
TTCGGAGAAG ACAAACCTGG CGAATCCATA GTAAATGAAT CCGCCATGAA ATTTGGAGTA
CGAAAAGTGT ATGTGTACAT ATTGAATTGA
|
|---|
| Protein sequence | MEININSVFE ELKNREILTQ KNVSDIKNYI SVRYPNHSPQ KKAAIFADAV NKIINKNISS
ISITYRDGIR KTLLRETVKK TPFAINANDV YHACVNSGFK EDNFINEVSQ WCGNILENPH
IKDAVKDYTL KLISLAETPS TIDDTVNNSI NDTKCEPLSH DRDTELLPEN VSGQDVKMPD
AEVIEEISVS DDTPVESEYV SSIELDAASN IPDTGSTLGT HETGSIKSVP GIKKIVIAAS
ALVLIITFFS VALSGKLKKT AGTVQPSAPE ATPSPSYVSI FNSLNTPDDL YLKKAILSNL
GYSMGIHRNV PKHKKVMYLT ATAYDLSYES CGKTRDHPEY GITYTGTRAK LGRTVAVDPS
VIPLGSEMYI IFPEEYSHLN GVYIAEDTGS LIKGNKIDIF FGEDKPGESI VNESAMKFGV
RKVYVYILN
|
|---|
| |