| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2492 |
|---|
| Symbol | |
|---|
| ID | 4809430 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | + |
|---|
| Start bp | 2961599 |
|---|
| End bp | 2962657 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 352 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640107907 |
|---|
| Product | baseplate J-like protein |
|---|
| Protein accession | YP_001038887 |
|---|
| Protein GI | 125974977 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3299] Uncharacterized homolog of phage Mu protein gp47 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGAAG ATAAGACTTA TGAAAATATA TTGAACGATA TGCTAAGCAG GGTATCAAAT
GATGTAGACA AAAGAGAAGG TTCTATTATT TATGATGCTC TAGCTCCAAT TGCTTATAAA
TTAGCCGAAA CATACTTCCA ATTAAATAAT TATGTTGATT TATTTTTTGC AGACACTGCA
GTAGGAGAGT TTCTGGAGCG AAGGACTGCT GAATCAGGAG TGGAACGGCG ACCTGCTACA
AAGGCAATAA GGAAAATTGT TACAACAAGG CCTGTAGATG TTGGCACAAG ATGGGGATTA
GAAGATACAA CATATGTTAT TATAGAAAAG ATATCTGATA CAGAGTATAG GGCCGAATGT
GAGCAGTATG GCACTATAGG AAATTTATAT TCGGGCGCTC TTGATAACAT AGATAATATA
TCTGATGTAT CTGCTGAACT AACAGATGTT CTCATTCTCG GCGAAGACGA GGAAACAGAT
GAAGAACTGT ATCAACGTTA CTTAGAGGAA ATCAATGCCA TACGATACGG TGGTAATGTG
GACCAATATC GTGAGTGGAT CAGTGCTATC CCTGGTGTTG GACGCTTTAA AATCCAACCG
TTATGGAACG GCCGCGGTAC TGTTCGAGCG ATTATAACAG ATGCAAATAA TCAAGTGCCT
AGCCAGGAGC TTATTGACCT TGTACAAAAT ACATTAGATC CATATCAGGA TGGTATGGGG
ACCGGCCTTG TACCGATTGG ACATGTGTTT ACGGCCATGG GGGCTATCCC GAAGGTCGTG
AACGTCACCA TGACTGTAGT GTTCGAGGAA GGTTATGGCC CGGCTGATAT ACAGCAAGAT
GCCGAACGGA TTATCACCGA ATACTTCTCC GAAATCAACT TCGAGGACCA GAAATTTGTG
CCGACCACGG TCCGGCACGC CGTCCTCCTG AGCCGTCTGA TCAATATTCC GATGGTTCGG
GATATCCTGG TGCTAACGCT GAACGGTATA GATGGTAATA TCACGCTTGC GCCTGATGAA
GTTGCCAGCC TCGGGACGGT GACGATAAAT GCTGATTAA
|
|---|
| Protein sequence | MFEDKTYENI LNDMLSRVSN DVDKREGSII YDALAPIAYK LAETYFQLNN YVDLFFADTA
VGEFLERRTA ESGVERRPAT KAIRKIVTTR PVDVGTRWGL EDTTYVIIEK ISDTEYRAEC
EQYGTIGNLY SGALDNIDNI SDVSAELTDV LILGEDEETD EELYQRYLEE INAIRYGGNV
DQYREWISAI PGVGRFKIQP LWNGRGTVRA IITDANNQVP SQELIDLVQN TLDPYQDGMG
TGLVPIGHVF TAMGAIPKVV NVTMTVVFEE GYGPADIQQD AERIITEYFS EINFEDQKFV
PTTVRHAVLL SRLINIPMVR DILVLTLNGI DGNITLAPDE VASLGTVTIN AD
|
|---|
| |