Gene Cthe_2284 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_2284 
Symbol 
ID4809873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp2718091 
End bp2720199 
Gene Length2109 bp 
Protein Length702 aa 
Translation table11 
GC content42% 
IMG OID640107690 
ProductCheA signal transduction histidine kinases 
Protein accessionYP_001038679 
Protein GI125974769 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0643] Chemotaxis protein histidine kinase and related kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAGCA TATTTGAAAG TCCGGAGCTG ATAGGGGCTT TTATCGGCGA AGTGGAAGAG 
CAGCTACAAC TTCTCGAAAA CAACGTTGTA GAGTTGGAGA AAAACGGTGG CACAGCAGAG
GTGGTCCAGG AATTATTCCG TGCGGCACAT ACCTTGAAAG GTTCTTCTGC CACTATGGGT
TTTGAAAAGA TGAAAACTCT TACCCATGAA ATGGAAAATG TTCTGGATAA AATACGCAAT
GGTCTTCTCG AAATATCCAG GCCTGTTATC GATGTTCTTT TTGAGTGTTT GGATTGTTTG
AACATGCTAA AGGAAGATTT TGTTTCTGAT TCAAACAACG TCAAAACAGA GATAACTCCT
GTGATAACCA AATTAAAAGA GATATCATCT GAAAATGAAA CAAATAACCA AAACAGTGAT
TCGGACAAAG CTGAAAATTT AGAAACCGGA CGTCGGGAAC AACCGATATT TGTACTTGAT
GAAAAACAGC AGGAGCAGAT AAATCAGGCG CTTGGCATTG GCCAGAATGT TCTTGTATGC
GAGGTTGAGA TTTTGGAAGA CAGCCAAATG AAATCAGTTC GGGCCTGCTT AATAATGAAC
TTCCTTAATG AGTGGGGAAC AGTCATAAAT ATGGTTCCCA ATGTGATGGA AATACCAATA
GATTCTGATG TCGGCAAAGT GGCTTTTTTG GTTGTCACTC AAATGAGTGC CGACGAGTTG
CGGCAGAAAG TACAAAATGA CCTGATGGAT ATTAAGGAAG TCAGAGTTTT CCCCTATTTT
ATTCAAAATT CAATATCTCA GACAAAGGAC GGAGAAACCG GGGTACGGGA TAAAGATAAT
AGCAGCGGCG TCAAAACGGC GACAGAGGAA AAAAGGGTTG TACATACTGT AAGAATTGAT
GTGGACCGTC TTGAGAGGAT GATGGACCTG GTAGGCGAAC TGGTGATTGA GCAGATACGG
ATTGCCCAGG TTGCAAACAA CTTATATAAC CAATACCCTT CTGACGAAAC CGTTGATGAC
TTGATAGGCA TTTCAAACCG TGTATCGATA TTAATCAATG AGCTTCAGGA AGGAATTATG
AAAACCCGTA TGATACCGGT ACAGCAGTTG TTCAGCCGTT TTCCAAGAAT GGTCAGGGAC
TTGTCCGTCT CATTGAATAA AGAAGTTAAT TTAGTGCTGG AAGGCGGGGA AACTGAAATA
GACAGGACCA TCATGGAGGA AATGAGTGAT CCGCTAATCC ACCTTATACG AAACGCCATA
GACCACGGGA TTGAAAATCC GGAAATTCGC AAAAAGTTGG GAAAGCCTGA ACAAGGCACA
TTACGGGTGA CAGCGTTGCC TGAGGACAGC AATGTAATTA TAACGGTTGA AGATGACGGA
GCCGGAATTG ACCCTCAGGA GATAAAACAG TCAGCCATTA AAAAGAGGAT TGTTACAGAG
CAGGAAGCAA ACAACATGAC TGAGCAGCAG TTAATAAACC TCATTTTTCA AACAGGCTTT
TCCACTTCCC AGAAAGTGAG CGATGTTTCC GGCCGTGGGG TGGGAATGGA TATTGTAAAA
ACCCATATTG AAAAATTGAA TGGAATCATT GATGTTGAGA CTTGTGCAGG CAGTGGGACA
AAGTTCATAA TCAAACTGCC AATCAAGCTT CCCCTCACTC TTGCAATATT AAAAGGGCTT
TTGGTTAAAA TCAGCAATGA AACTTATGCT CTTCCTATGA ACAATGTGGT TGAAATTGTA
CGAAAGCCAA AAAATGAAAT TGAATCCATC AATGGGCAAG CAGTGGCAGT TATAAGGGAC
AGAGCGATTC CTTTAATATG GCTGCATGAC TATTTCGGCA TCCCACGGGG TAATGAGAGG
AAAAATACTC TGATTGTTTT GCTGGGAATA GCTGAAAAAC GTTTTGGGCT TGTGGTGGAT
GAGCTTATAG GGAACCAGGA AATTGTTGTC ACAAACCTTG GTTCTTATAT AGGCAAAGTG
GAAGGTATTT CCGGAGCAAC AATTTTGGGA GACAGAAGTG TGGCGTGCAT ACTGGACGTG
GTAGGGATTG CGAAAATAGT GAACAGCAGG AAAGTTTCCA GGATAGATGT TGAATATTCA
AAACAGTGA
 
Protein sequence
MASIFESPEL IGAFIGEVEE QLQLLENNVV ELEKNGGTAE VVQELFRAAH TLKGSSATMG 
FEKMKTLTHE MENVLDKIRN GLLEISRPVI DVLFECLDCL NMLKEDFVSD SNNVKTEITP
VITKLKEISS ENETNNQNSD SDKAENLETG RREQPIFVLD EKQQEQINQA LGIGQNVLVC
EVEILEDSQM KSVRACLIMN FLNEWGTVIN MVPNVMEIPI DSDVGKVAFL VVTQMSADEL
RQKVQNDLMD IKEVRVFPYF IQNSISQTKD GETGVRDKDN SSGVKTATEE KRVVHTVRID
VDRLERMMDL VGELVIEQIR IAQVANNLYN QYPSDETVDD LIGISNRVSI LINELQEGIM
KTRMIPVQQL FSRFPRMVRD LSVSLNKEVN LVLEGGETEI DRTIMEEMSD PLIHLIRNAI
DHGIENPEIR KKLGKPEQGT LRVTALPEDS NVIITVEDDG AGIDPQEIKQ SAIKKRIVTE
QEANNMTEQQ LINLIFQTGF STSQKVSDVS GRGVGMDIVK THIEKLNGII DVETCAGSGT
KFIIKLPIKL PLTLAILKGL LVKISNETYA LPMNNVVEIV RKPKNEIESI NGQAVAVIRD
RAIPLIWLHD YFGIPRGNER KNTLIVLLGI AEKRFGLVVD ELIGNQEIVV TNLGSYIGKV
EGISGATILG DRSVACILDV VGIAKIVNSR KVSRIDVEYS KQ