Gene Cthe_1629 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1629 
Symbol 
ID4809324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp1955943 
End bp1956671 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content44% 
IMG OID640107045 
Productpeptidase S14, ClpP 
Protein accessionYP_001038046 
Protein GI125974136 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0740] Protease subunit of ATP-dependent Clp proteases 
TIGRFAM ID[TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAACAAAT CACAAAAACA AAAACCGGTT CGCCGCTTCT GGAACTGGAT ACAAAACGAT 
GATGGCAGCC GGACATTATA TATTGACGGC CCAATAGCTG AAGAAAGCTG GCTGGGAGAC
GAAGTAACTC CCAAACAGTT CAAATCAGAG CTGTTGTCCG GAGAGGGTGA TATAACGATC
TGGATCAACA GCCCTGGCGG AGATATATTT GCAGCTAATC AAATTTACAA CATGCTTATG
GATTACAAAG GCAAAGTGAC GGTAAAGATT GACGGTATTG CAGCCAGCGC CGCTTCGGTC
ATAGCTATGG CCGGAGGTGA CGTCTTTATG TCACCAGTCA GCATGATGAT GATTCACAAC
CCTATGACAA TAGCCATCGG TGATACAGAA GAAATGGAGA AAGCTATCGC AATGCTGGAA
GAAATAAAGG AATCCATCAT CAACGCTTAT GAGCTGAAAA CCGGACTTTC CAGGGCAAAA
ATATCGCACC TAATGGATGC AGAAAGCTGG TTTAACGCAA GAAAAGCGGT GGAACTTGGC
TTTGCTGATG GAATCTTGTT TATGGAGGAT GAATCATTCC CATCCGAGTT TGAAGTATCA
GGAGGAATGA TCTTCAGCAG GCAGGCAGTA ACAAATTCCA TCCTGCAAAA GCTTAAACCA
AAAGAAAAAC CAAAAGGAAC ACCAATTGAG TCGCTTGAAA AGCGGCTTTT TCTACTTTTA
CCCCACTAA
 
Protein sequence
MNKSQKQKPV RRFWNWIQND DGSRTLYIDG PIAEESWLGD EVTPKQFKSE LLSGEGDITI 
WINSPGGDIF AANQIYNMLM DYKGKVTVKI DGIAASAASV IAMAGGDVFM SPVSMMMIHN
PMTIAIGDTE EMEKAIAMLE EIKESIINAY ELKTGLSRAK ISHLMDAESW FNARKAVELG
FADGILFMED ESFPSEFEVS GGMIFSRQAV TNSILQKLKP KEKPKGTPIE SLEKRLFLLL
PH