| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1562 |
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| Symbol | |
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| ID | 4810069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 1890324 |
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| End bp | 1891535 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640106980 |
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| Product | hypothetical protein |
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| Protein accession | YP_001037981 |
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| Protein GI | 125974071 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00597787 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGCAT ATGCATTAAC TTCGAATAGA ATCTCCTTTC TAAATCTCAG AAAAAAGTCC
TTTCGCACCT TTGCATTAAT ATTGGTGGTT GCAATCCTGT CTTTTGCACT TTTTGGAGGA
ACTGTCCTGT CCTTTAGCTT TAGAAACGGG CTTCGCAGTG TAGAAGCAAG GCTTGGTGCA
GATTTGATTG TGGTTCCTCT CGGGCATGGG AAACAACAGG AATCCATTCT TTTAACCGGG
GAGCCGTCCT ACTTTTATTT TAATAAAGAG ATTGTCCAAA AGCTTCAGGA AGTTGAGGGT
ATTTCCAAAC TGTCGACACA ATTTTACCTC ATTTCACTAA GTACAGGATG CTGTTCTCTT
CCTGTGCAGA TTGTGGGATT TGATCCGGCT ACGGATTTTT CAATTCAACC GTGGATTCAA
GAAACTCTGG GGGGAAATCT TGAAAACGGT GCTGTTATTG TCGGAAGTGA TATTATGATT
GAGGATAACA AGCACATTAA ATTTTTTGAT AAAGAATATC CCGTGGCGGC AAAGCTTGAC
AAAACGGGGA CAGGATTGGA TCAATCCGTA TTTGCTACTA TGGAAACCCT TAAAGACCTA
TATTCCGGTG CAAAAGAAAA AGGCTTTAAC TTTTTGGAGG ATACGGATCC TGATACCTTT
ATTTCATCCG TACTGATTAA AGTTCGTGAA GGGTACAATA TAGATCAAGT CATAACCAAT
ATCCGAAGAA AAACGGACGG TGTCCAAATT GTCAGGACAC AAAATTTAAT TACCGGCATT
TCAAAGAGCC TTGGCAATAT TATCACCTTT TTTAATGTAT TTGCATTGGT GCTTTTGGGC
GTAACCTTGG TAATTTTGAC GGTGGTATTT TCAGCCTCAG CCAATGAACG AAAAAAGGAA
TTTGCTATTA TGAGGATACT GGGGGCCACA AGGAAAAAGC TTGCTGCCGT TTTGATTTGG
GAGTCGCTGT ATATCAGTGT GTCAGGCGGT GCTATAGGAA CTATACTTGC GGCAATATTT
GTATTTCCCT TTAACGTTTT CATTGGTGAC AGCATAGGAT TGCCTTACAT ACAGCCTTCT
CTTCTTTGGA TTATAGCTAT TTTACTGGGA ACATTACTCG TGGCTTTTTC CCTTGGCCCA
ATTGCTTCAG CCTATTCTGC CGTTAAAGTC AGCCGTTCCC AAACTTATCT GACATTAAGG
GAGGGTGAGT AG
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| Protein sequence | MMAYALTSNR ISFLNLRKKS FRTFALILVV AILSFALFGG TVLSFSFRNG LRSVEARLGA
DLIVVPLGHG KQQESILLTG EPSYFYFNKE IVQKLQEVEG ISKLSTQFYL ISLSTGCCSL
PVQIVGFDPA TDFSIQPWIQ ETLGGNLENG AVIVGSDIMI EDNKHIKFFD KEYPVAAKLD
KTGTGLDQSV FATMETLKDL YSGAKEKGFN FLEDTDPDTF ISSVLIKVRE GYNIDQVITN
IRRKTDGVQI VRTQNLITGI SKSLGNIITF FNVFALVLLG VTLVILTVVF SASANERKKE
FAIMRILGAT RKKLAAVLIW ESLYISVSGG AIGTILAAIF VFPFNVFIGD SIGLPYIQPS
LLWIIAILLG TLLVAFSLGP IASAYSAVKV SRSQTYLTLR EGE
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