| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1335 |
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| Symbol | |
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| ID | 4809475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 1626060 |
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| End bp | 1626689 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640106759 |
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| Product | peptidase A24A, prepilin type IV |
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| Protein accession | YP_001037760 |
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| Protein GI | 125973850 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4960] Flp pilus assembly protein, protease CpaA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.936907 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATATA TCTTGTTGCT TGTTTTGGGA ATTGTATCAG CCTATATAAT TAATCTTGCC
ACTGATTATG AAAAATGCGG GGATGCAGAC AGACTGAAGT GGTTTTTCGG CTATGTATGT
GGAAAGCCAC AGTACATAGT CGTAATGGTG TTAACTCCCC TTGCTTTTAT GCTTTTATAT
TGTAAGTCGC GGACAAATCT TGAAATGATT CGCTATGCTG TTTTGTACAT ATTGCTGGCG
TCTTCTTCTT TAAAAGACTA TAAAGAGAGG ATTGTATCCA ACAAGCTGGT TGCTGCCGGA
ATAGTTTTGG GACTTGTTAT GGCGGCATTG GATGCTGAGC CGGAAAAATT TATACAGTCA
GTAATTCTTT TTATTGCAAT TGCTTTAATT ATGTCACTTA TCTCCTTTGC CACTAAAGGA
GGAGTCGGGA TGGGCGATAC AAAACTTATC GCTGTGTCCG GCCTTTATAC CGGACTTACA
GGTATTATAT CAGTCTTGTT TTATTCTTTT ATATTAAGCG GCATAACGGG AATAGTGCTT
CTTATTTTAA AAAAAGCGAA CTCAAAATCC AGAATACCAT TTATACCCTT TTTAACCTTG
GGTTTTTTGA TTTACCTGCT GCTCCTGTAA
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| Protein sequence | MTYILLLVLG IVSAYIINLA TDYEKCGDAD RLKWFFGYVC GKPQYIVVMV LTPLAFMLLY
CKSRTNLEMI RYAVLYILLA SSSLKDYKER IVSNKLVAAG IVLGLVMAAL DAEPEKFIQS
VILFIAIALI MSLISFATKG GVGMGDTKLI AVSGLYTGLT GIISVLFYSF ILSGITGIVL
LILKKANSKS RIPFIPFLTL GFLIYLLLL
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