Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_0727 |
Symbol | |
ID | 4810345 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 883592 |
End bp | 884518 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640106144 |
Product | cell envelope-related transcriptional attenuator |
Protein accession | YP_001037155 |
Protein GI | 125973245 |
COG category | [K] Transcription |
COG ID | [COG1316] Transcriptional regulator |
TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0775994 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTTA GAAGATTTTA TTTAATTGTA TGTTCAATAT TGTCAGTTTT TATGTTTTTT ATCGGTTCAC TGACCCTTTT ATACATCAAT TTCAATACGG ATGTCGAAAA ACCTGTTGAC AATTCGGGGA CACTGATTGA TGATATTTTA AGTCCTTTAA AAGGTGTTAA CGAGGATTTG AACGTACTGG TGTTGGGCGG TGACAAGGTT AACAACAATA CCGACACAAT GATGTTGGTA AATTTCAAGC CTTCCACATC AAAAGTAAGT ATTCTTTCGA TACCGAGGGA CACGAAAGTT AAGATAAACG GCAAGAAAGC AAAAATAAAC TCCGCTTACC CCACAGGAGG CGGAGAACTT GCAGTTCAGA CGGTAAGCGA GCTTTTTGGC ATAGATGTAA AATACTATGT TTTTGTTGAT ACTTCTTCTT TCAGAAAAAT AATTGATATT TTGGGCGGAG TGGATTATTA CGTTCCGGTG GACATGGATT ATGATGATCC TTTGCAGGGA CTTAGTATTC ATATAAAGAA AGGGCAGCAT CATTTTGACG GTGCCATGGC CGAGAAATTT ATGAGGTTCA GGCAGTATAA CAACGGCCGT GTGAACGAAT ACTATGACGG AAGTGACCTG AAAAGAATTG ATGCCCAGCA GAATTTTATC CGCGAACTGG TTAGGCAGAA ACTTAATATT TTTTATCTGA CTAAAGTAGA TGATATTGCC AGTACCATTT TCAGCAATAT TGACACCAAT CTTAATATGA GTGAAGTTTT AAAGCTGACC GGAAGCGTTT CAAAGGTTCA GGCCGACAGC ATAAACATGT TGAAAGTTCC TGGGAAATCC GTATTGGACG GAGCATGGTA CTATGTAATT GACTCTCAGG AAACAGACAA GATTATAAAT GAGTATTTCA GGACAAGGTA TAAGTAA
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Protein sequence | MNFRRFYLIV CSILSVFMFF IGSLTLLYIN FNTDVEKPVD NSGTLIDDIL SPLKGVNEDL NVLVLGGDKV NNNTDTMMLV NFKPSTSKVS ILSIPRDTKV KINGKKAKIN SAYPTGGGEL AVQTVSELFG IDVKYYVFVD TSSFRKIIDI LGGVDYYVPV DMDYDDPLQG LSIHIKKGQH HFDGAMAEKF MRFRQYNNGR VNEYYDGSDL KRIDAQQNFI RELVRQKLNI FYLTKVDDIA STIFSNIDTN LNMSEVLKLT GSVSKVQADS INMLKVPGKS VLDGAWYYVI DSQETDKIIN EYFRTRYK
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