Gene Cthe_0562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0562 
Symbol 
ID4808237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp689961 
End bp690341 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content37% 
IMG OID640105976 
Producthypothetical protein 
Protein accessionYP_001036991 
Protein GI125973081 
COG category[S] Function unknown 
COG ID[COG5341] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGAAAA AAGGTGATTT CTTTATTTTA GGATTTGTCC TGATATTGAT AATTGTATCT 
TTTACCGGTG TTTACCTTTA CAAGAATTCG GGTTCAAATG CTCATAAAAT AGCGGTTATT
ATAAAAGACA ACGAGGAAAT AAAAAGGATT GACATAGATA ATGTAAATGA ACCTTTGGAA
ATCAGTGTTT CAGGCGAATA TAACAATATA ATACTGGTGG AAAAAGGACG AATAAGGTTT
AAGGAAGCCG ATTGCCCAGA CAGGGTATGT GTAAATACCG GTTGGCTTAC GGGAAAAGGG
GATACGGCGG TGTGCCTTCC CAATAAAACC ATGATAAAAA TTGAGGGGCA ATCGAGTGAC
GTGGACATAG TTACGTATTA G
 
Protein sequence
MLKKGDFFIL GFVLILIIVS FTGVYLYKNS GSNAHKIAVI IKDNEEIKRI DIDNVNEPLE 
ISVSGEYNNI ILVEKGRIRF KEADCPDRVC VNTGWLTGKG DTAVCLPNKT MIKIEGQSSD
VDIVTY