| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0296 |
|---|
| Symbol | |
|---|
| ID | 4808514 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | + |
|---|
| Start bp | 370827 |
|---|
| End bp | 372302 |
|---|
| Gene Length | 1476 bp |
|---|
| Protein Length | 491 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640105707 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001036727 |
|---|
| Protein GI | 125972817 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000000491065 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAAAATA CTTTTAGATG GACATTGAAC AAACTGGTTG TTACAGGAGC ATGTGCGTAT
GTTCTTTTAA TTCTGCTGTT TATGTTAAAT TCCGGTTTGG TTCGGGTGTC CGGGAATGTT
TTGCTGAATA AGTCTTTGGA TGTGTTGTTT TTCACGGTGG CGGCAGTTGT AGGTTACGGA
GTGCTACTGC TCTTTGAAAA AGTTTTAAAT TTGCGTATGT TGAATAAGGA GTATGCAAGG
ATACTGATTG TGGTTTTAAT GACCCTGATT ACGAGGCTTG TTTGGATACA TATTGTAGAT
ATTACTCCCA AAAGTGATTT TGAGCTGTAC AATACTTTGG CGGAGGCATT CTCGCGGGGA
GAGGCCGCCG GAGGCAAGTA TGTGGCTCTT TTTCCCCATA CATTTGGTTA TCCCTTTATA
CTGGCAACGG TATATCGAAT TTTTTCTCCT GACAAGTATT TTGCTTTGCT TTTAAATATT
TTGTTTGAAG CAGGCACGGG TGTTGTTTTA TATTATCTTG GGAAGATGGT CTCAAACTGG
AAAACAGGTT TCTTTGCAGG CATTATATGT GCTTTATGGC CTTCCCATGT GTTTTATTCT
TCAATTGTTT GCACCGAGCC GCTGTATACA TTATTAATGG CGCTTTTGAT ATTTGTATAT
TTTAAGGTGT CAGTCAAAAA TAAAAGCTTA TTGCATTCCT GCGTTTTGTA TCTTTTGCTC
GGGTTTTTAT GTGCGGCGGC CAATGCGATC CGTCCCATGG GTACTCTGCT TGTTGCAGTT
CTGGGAATAA CTGAGGTTGT GAGAATAATT AAGAAAAAGG AGGGGTTAAA ACAAAGTTTT
GCAGGATTTG TGCCCTTTGC CGTATTCTTA ATAGCATATT TCTCTTTTGT TAATTTGACA
GGCATGTATG TTTCCTATAA AATTGGCTAC AATACGGCTA AAAATCCCAT AGGTTTTAAT
ACTTATGTCG GCGCCAATAT TAATTCCAGC GGGATGTGGA ACCAGAGTGA TGCCAATGTG
CTAATGGATT TTATGAAGCA GGAGCCTTTT GATGCCCAAA AAATACACGA ACAGTTGCTC
AATCTGGCAA TTCAAAGGGT GAAAAGCCAG GGAACGGGTA ATTTGAAGCT TGTAATAAAA
AAGAATATGA TCATGTGGGG CAGGGACGAT GAAGTTGTAA CCTATATGAT TGCCGGAAGC
GGTGATAAAA CCTCATCGTT ATTGGAAGTA AAGAACTCTG AAGGTCTTTT GAGGTATATT
TGCAACTTCT ATTACTACAT GATAGTTATA TTGGCATTTG GTGGCCTTTT GAAGCAGTGT
GCTAAAGAGG ATAATCCAAT CCTTATGGCT TTACTGCTGC TGTTTCTTGG AATTGGTGCT
ATACATACCG TTGTTGAGGT ACATGGCAGG TATCATTATT CATCTATGGC TGTTTTTGCC
ATACTTGCCG GAATAAACAA TTTTAAAATT AAATAG
|
|---|
| Protein sequence | MKNTFRWTLN KLVVTGACAY VLLILLFMLN SGLVRVSGNV LLNKSLDVLF FTVAAVVGYG
VLLLFEKVLN LRMLNKEYAR ILIVVLMTLI TRLVWIHIVD ITPKSDFELY NTLAEAFSRG
EAAGGKYVAL FPHTFGYPFI LATVYRIFSP DKYFALLLNI LFEAGTGVVL YYLGKMVSNW
KTGFFAGIIC ALWPSHVFYS SIVCTEPLYT LLMALLIFVY FKVSVKNKSL LHSCVLYLLL
GFLCAAANAI RPMGTLLVAV LGITEVVRII KKKEGLKQSF AGFVPFAVFL IAYFSFVNLT
GMYVSYKIGY NTAKNPIGFN TYVGANINSS GMWNQSDANV LMDFMKQEPF DAQKIHEQLL
NLAIQRVKSQ GTGNLKLVIK KNMIMWGRDD EVVTYMIAGS GDKTSSLLEV KNSEGLLRYI
CNFYYYMIVI LAFGGLLKQC AKEDNPILMA LLLLFLGIGA IHTVVEVHGR YHYSSMAVFA
ILAGINNFKI K
|
|---|
| |