Gene Csal_3296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_3296 
Symbol 
ID4028841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp3673213 
End bp3673983 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content63% 
IMG OID637968511 
ProductABC transporter related 
Protein accessionYP_575339 
Protein GI92115411 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.835077 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGATA ACGCACAAGC TTCCGCCGCG CCGATCGTGC AGTTGGAGAA GGTCAACAAA 
TACTTCGGCA AGCTGCACGT GATGCAGGAC ATCGATCTCG AGATCACCCC CGGCGAGGTG
GTCGTCATCA TCGGCGCCAG CGGCTCCGGG AAATCCACGT TCATCCGCTG CGTCAACGGC
CTGGAAGAGT TCCAGTCCGG CCGTATCATC GTCGATGGCA ACGAACTCAC ACCGTACGGC
AAGGGGGGCA AATCGCTGCA GACCATCCGG ACCGAGGTCG GCATGGTCTT CCAGCAGTTC
AACCTGTTTC CGCATCTGTC GGTACGGGCC AACGTCACGC TGGCCCCCAC CCGGGTCCGC
GGTCTGGACG ATGCCCAGGC ATCCAAAATC GCGGACCGCC TTCTCGAACG GGTCGGCATC
AGCGATCAGG CCGACAAGTA CCCCGGGCAG CTCTCAGGGG GCCAACAACA GCGTGTCGCC
CTGGCCCGCG CCCTGGCGAT GGAACCGCGC CTGATGCTGT TCGATGAGCC CACCTCGGCA
CTCGATCCAG AAATGATCGG CGAGGTACTC GATGCCATGC GCGAACTGGC CAGCGAAGGC
ATGACCATGA TGATCGTCAC CCACGAGATG GGCTTCGCCC GCGAGGTCGC CGATCGCGTC
ATCTTCGTCC ACGCCGGACG CATCGTCGAA CAGGGCTCGC CCAGCCAGGT CTTCGACCAT
CCCCAGCACG AGCGCACCCA GGCCTTCCTC TCCCGCGTGC TCAAGCACTG A
 
Protein sequence
MSDNAQASAA PIVQLEKVNK YFGKLHVMQD IDLEITPGEV VVIIGASGSG KSTFIRCVNG 
LEEFQSGRII VDGNELTPYG KGGKSLQTIR TEVGMVFQQF NLFPHLSVRA NVTLAPTRVR
GLDDAQASKI ADRLLERVGI SDQADKYPGQ LSGGQQQRVA LARALAMEPR LMLFDEPTSA
LDPEMIGEVL DAMRELASEG MTMMIVTHEM GFAREVADRV IFVHAGRIVE QGSPSQVFDH
PQHERTQAFL SRVLKH