Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_1661 |
Symbol | |
ID | 4029123 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | + |
Start bp | 1890056 |
End bp | 1890949 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637966850 |
Product | type II secretion system protein |
Protein accession | YP_573713 |
Protein GI | 92113785 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2064] Flp pilus assembly protein TadC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.146099 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCGCGG TCGTGCTCTT GTTGGCAAGT GGCGTGGCGC TGATGGTCGC CGCCGGGGCG TGCTGGATCA TCGCCCAGCG CGCGGCGGAG CGGCAGACGC CCACCGCGCC GGCGCCGTGG CGGCAGACCG AGTCATGGCT GCTGCGCAGC GGCAGCGCCT GGCGCGTGCA TCGGCGCCGC CACGCGCGCA GTGCCGAACT GGCCATCATC CTGCGCCAGG CCGGCTTCAT CGGCTCGCGG GCCCAGGCCC GGCTGCTCGC CGTGCTCGGC ATCCTGGCCG TCAGTGTCAC CCTGCTGGGC ATGCTGTGGG GCTGGGAGCA GGGCCGTGGC GTGGCGGGCA GCCTGTTTCT GGGCCTCGCC CTGGGGGCGT TGACGGGCGT GGTCGCCTGG GCCTGGCTGA AGAACCGGCG GCGGCGTCGC ACGCGCGTTC TCGACGAGGA AATCGGTCTG GTGCTGCAGG TCACCCGCAT GCTCTGGGAA GCCGGCATGA CGCTGGAAAG CGTGCTGCAG GGCCTGATCG ACAACCTTGC CAATACCGCC CCTGAAACCG TGCGTGAGCT GCGCAGCGTG ACCCACAAGA TCGAAGCCGG CCAGGCCCGC GAGGAAGCCC TGGAAGAGGT CGCCGGCATT CAGGCCAGCG AGGGCCTCGG CGATCTGCTC AAGCTGCTGG CGCAGGTCTC CGCCAGCGGC GGCGGGGCGC GGGACTCGCT GCGCACCCTG GCCGATCTGC TGCGCGACCG CCGCCGCACG CGCCTGCAAG AAGCCGTCAC TCGGCTCTCG GGGAAGATGT CGCTGGTGAT GATGGTGTTC CTGTTTCCCG CCTTGCTGAT CGTGCTGGCC GGGCCCGCCG TACTCAATCT CGCCGGAGCG CTGGCGACGC TGGGAGGACA ATGA
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Protein sequence | MVAVVLLLAS GVALMVAAGA CWIIAQRAAE RQTPTAPAPW RQTESWLLRS GSAWRVHRRR HARSAELAII LRQAGFIGSR AQARLLAVLG ILAVSVTLLG MLWGWEQGRG VAGSLFLGLA LGALTGVVAW AWLKNRRRRR TRVLDEEIGL VLQVTRMLWE AGMTLESVLQ GLIDNLANTA PETVRELRSV THKIEAGQAR EEALEEVAGI QASEGLGDLL KLLAQVSASG GGARDSLRTL ADLLRDRRRT RLQEAVTRLS GKMSLVMMVF LFPALLIVLA GPAVLNLAGA LATLGGQ
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