Gene Csal_1228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1228 
Symbol 
ID4027549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp1407096 
End bp1407896 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content64% 
IMG OID637966406 
ProductCof protein 
Protein accessionYP_573282 
Protein GI92113354 
COG category[R] General function prediction only 
COG ID[COG0561] Predicted hydrolases of the HAD superfamily 
TIGRFAM ID[TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACCTC ATTTGATCGT CACGGATCTG GACAACACGC TGCTCAATGC CGAGCACGAT 
CTCGATGAAT TGACCATCGA GACCTTTCAG GCACTCGCCG CACGTGGACA TCACCTGGCG
TTGGCGTCTG GACGTCATTT TCACGATATC ACGGCGTTCC GCCGACGGCT GGGCGTGCCC
GCGTACATCA TGAGCACCAA CGGGGCGCAC CTCTACGGGC CCGACGACAG CCTTATCGCC
GAGCAGTGGG TGCCGGCCGA GCTGGTTCGG GCGTTGGTCG AGCTGCCGCG CGGTGCCGAC
ATCCGGCTCA ACCTGTATAC CGGGGAGGAG TGGCTGATCG ATGCGTCGGC GCCCGAGCTG
AAGGCCTTGC ACGCCCACAC CGGATTCCAC TATCGGGTGG CCGATCTCGA GGCGCATGAC
GGCCGCGGCG TGGGCAAGGT GCTGTGCATC GGTGACCCCG AGGCCCTGGC AGCGCTGGAG
CAGAGCATCA CCGAGACGCT GGGCACGCGG CTGCACATGA CCTATTCGAT GGCCCATTCG
CTGGAGATCA TGGCCGAGGG TGTCAACAAG GGGGCCACGC TGGAACGGTT GCTGGCCCAT
CTCGGTCTCC CCGCCGCGCG GTGTCTGGCG TTCGGCGACA ACCTCAACGA TGCCGAGATG
CTGGCGCTGG CCGGCCACGG GTTCGTCATG GAGAATGCGC ATCCCGACCT GCCGCGTCGG
GTACCTGACG CCATCCGCAT CGGTCACCAT CATCCGAATG GCGTGGCCTG GCAGTTGCGC
GATTTCTTTT CGCTGGCATG A
 
Protein sequence
MQPHLIVTDL DNTLLNAEHD LDELTIETFQ ALAARGHHLA LASGRHFHDI TAFRRRLGVP 
AYIMSTNGAH LYGPDDSLIA EQWVPAELVR ALVELPRGAD IRLNLYTGEE WLIDASAPEL
KALHAHTGFH YRVADLEAHD GRGVGKVLCI GDPEALAALE QSITETLGTR LHMTYSMAHS
LEIMAEGVNK GATLERLLAH LGLPAARCLA FGDNLNDAEM LALAGHGFVM ENAHPDLPRR
VPDAIRIGHH HPNGVAWQLR DFFSLA