Gene Csal_0330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_0330 
Symbol 
ID4026645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp367444 
End bp368184 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content65% 
IMG OID637965479 
ProductLmbE-like protein 
Protein accessionYP_572391 
Protein GI92112463 
COG category[S] Function unknown 
COG ID[COG2120] Uncharacterized proteins, LmbE homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0698342 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGTCG CGTCTTCTTC TCCCGCTGGC CTGGTGGTCA GCGCACACTC GGCGGATTTC 
GTATGGCGGG CCGGTGGTGC CATCGCCCTG CACGCCCGGC AGGGCTATGC CATGCATATC
GTCTGCCTGT CGTTCGGCGA ACGGGGCGAA TCCGCCAAGC TGTGGCGCCA GGGCAACATG
AGCGAGGAAA AGGTCAAGGC GGCCCGCCGC GAGGAAGCCG AAGCGGCCGC CGCGGCCCTG
GGGGCCAGCG TCGAGTTCTT CGATATCGGC GACTACCCCA TGCGCGCCGA CAAGGAAACG
CTGTTCCGGC TCGTCGAGGT CTATCGCCGC GTGCAGCCCG AGTTCGTGCT CACGCATTCG
CTCAAGGATC CCTACAACTA CGATCACCCG CTTGCCACCG ACCTCGCCCA GGAAGCTCGC
ATCATCGCCC AGGCGGAAGG CCACAATCCC GGCGAGACCA TCGTCGGCGC CCCGCCCGTC
TACTGCTTCG AGCCGCACCA GCCGGAGCAA TGCCAGTGGC GCCCCGACGT GCTGCTCGAC
ATCACCGAGG TGTGGGACGA CAAGTACCGC GCGATTCAGT GCATGGCCGG CCAGGAACAC
CTGTGGGAAT ACTACACCCG CGTCGCCCTG CAGCGTGGCG TGCAGGCCAA GCGCAACATC
GGCATCACCG CGAACAAGAA CATCCAGTAT GCCGAGGGCT ATCAAAGCAT CTTTCCCCGC
GTCACGGAGA ATCTGGCATG A
 
Protein sequence
MTVASSSPAG LVVSAHSADF VWRAGGAIAL HARQGYAMHI VCLSFGERGE SAKLWRQGNM 
SEEKVKAARR EEAEAAAAAL GASVEFFDIG DYPMRADKET LFRLVEVYRR VQPEFVLTHS
LKDPYNYDHP LATDLAQEAR IIAQAEGHNP GETIVGAPPV YCFEPHQPEQ CQWRPDVLLD
ITEVWDDKYR AIQCMAGQEH LWEYYTRVAL QRGVQAKRNI GITANKNIQY AEGYQSIFPR
VTENLA