Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_0330 |
Symbol | |
ID | 4026645 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | - |
Start bp | 367444 |
End bp | 368184 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637965479 |
Product | LmbE-like protein |
Protein accession | YP_572391 |
Protein GI | 92112463 |
COG category | [S] Function unknown |
COG ID | [COG2120] Uncharacterized proteins, LmbE homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0698342 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGTCG CGTCTTCTTC TCCCGCTGGC CTGGTGGTCA GCGCACACTC GGCGGATTTC GTATGGCGGG CCGGTGGTGC CATCGCCCTG CACGCCCGGC AGGGCTATGC CATGCATATC GTCTGCCTGT CGTTCGGCGA ACGGGGCGAA TCCGCCAAGC TGTGGCGCCA GGGCAACATG AGCGAGGAAA AGGTCAAGGC GGCCCGCCGC GAGGAAGCCG AAGCGGCCGC CGCGGCCCTG GGGGCCAGCG TCGAGTTCTT CGATATCGGC GACTACCCCA TGCGCGCCGA CAAGGAAACG CTGTTCCGGC TCGTCGAGGT CTATCGCCGC GTGCAGCCCG AGTTCGTGCT CACGCATTCG CTCAAGGATC CCTACAACTA CGATCACCCG CTTGCCACCG ACCTCGCCCA GGAAGCTCGC ATCATCGCCC AGGCGGAAGG CCACAATCCC GGCGAGACCA TCGTCGGCGC CCCGCCCGTC TACTGCTTCG AGCCGCACCA GCCGGAGCAA TGCCAGTGGC GCCCCGACGT GCTGCTCGAC ATCACCGAGG TGTGGGACGA CAAGTACCGC GCGATTCAGT GCATGGCCGG CCAGGAACAC CTGTGGGAAT ACTACACCCG CGTCGCCCTG CAGCGTGGCG TGCAGGCCAA GCGCAACATC GGCATCACCG CGAACAAGAA CATCCAGTAT GCCGAGGGCT ATCAAAGCAT CTTTCCCCGC GTCACGGAGA ATCTGGCATG A
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Protein sequence | MTVASSSPAG LVVSAHSADF VWRAGGAIAL HARQGYAMHI VCLSFGERGE SAKLWRQGNM SEEKVKAARR EEAEAAAAAL GASVEFFDIG DYPMRADKET LFRLVEVYRR VQPEFVLTHS LKDPYNYDHP LATDLAQEAR IIAQAEGHNP GETIVGAPPV YCFEPHQPEQ CQWRPDVLLD ITEVWDDKYR AIQCMAGQEH LWEYYTRVAL QRGVQAKRNI GITANKNIQY AEGYQSIFPR VTENLA
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