| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_7182 |
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| Symbol | |
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| ID | 8363376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 8970572 |
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| End bp | 8974132 |
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| Gene Length | 3561 bp |
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| Protein Length | 1186 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644969316 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003126783 |
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| Protein GI | 256426130 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.893491 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGTAG TACTGGGATT GGTGCTTACC ACCAGTCTTA ATGTACTGGC AAAAGCTTCT
TTTGCAACGA AGATCACTCT TAATCTGCGT GATGTGGAAT TTAAGAAAGT GCTCACTGTA
ATTGAAAGCC AGAGCGACTA TCGTTTCATG TTCAGTAACA GGAACATACC AAATGATAAC
AAGGTAGACA TTAACGTGAA AGATGCTCAG ATCACCACAG TGATGGATCT GATCCTGAAT
AATTCTGGTT TTACTTACCA GGAATTATCT AACAACCTGA TCGTGATCAT GCCAAAAGGC
GCTATGCTGA AGGCGATCAA AGTAACAGGT AAAGTACTGG ACCAGACAGG TGAAGCGCTG
ATCGGTGCAT CTATTAAAAT AAAAGGGACT TCCGATGGGG TAGCTACGGA TGAAAATGGT
GCCTTCACCA TTAGTGTTCC GGATGACGCT GTGCTGGTTG TATCTTATGT AGGTTTTAAA
ACACAGGAGA TCCCTGTTAG TGGTAAAACG GCTATTACAG TTACACTGCA ACCAAATCAA
AGTATAATGA ATGAGGTGGT AGTAACGGCG CTGGGTATCA AAAGAGAGCA AAAAGCGCTC
GGATACGCGG TAAGTACTAT CACATCTGAA CAAATTACAG CTGCCGGCGC TACCAACTTT
GCTTCTGCAT TGTATGGTAA AGCTGCTGGT GTGAAAATCA CCACCGCTCC AGGTGGTGCT
ACCAGTGCGG TGAATATCCA GATTCGTGGT GTGAACTCCC TGAACTATAA CACCCAGCCG
CTGTATGTAG TGGATGGTGT GCAGATCAGG AACAACAACG AAAAAGGTGC TGGTGGTACA
AACAATACTG ATTACTGGTC TGATAACCGT ATCCGTGGTA ACGGTATCCT GGATATCAAC
CCTGCAGATA TCGAAAGTCT GACAGTACTG AAAGGTGCAA GTGCGACTGC ACTGTATGGA
TCTGATGCAG CGAGTGGTGT GGTGGTAATT ACTACTAAAA AAGGTATGAA AGGAAGAGGT
CTGGGTGTTG ATCTGAACTA TTCACACACC GCAGAAAGGG TTGCCTTTGC ACCAAGATAT
CAGAATGAGT ACGGTTCCGG TTATGACAGA ACAACTGCGG GTGCGAATGC GAACGCAGCA
GGTTGGGTCC CCATTGGAAC TGACGGAACA GTAAGGCCTT ACTTCAGGGC CTATGCGCAG
TTTGGACCAA AATTGGACGG CCAGCTGGTA CCCTGGTGGG ATGGTAGTAT GCACTCATAT
TCCCCCCAGC CCGACAACTA TAATCAACTC TTTCAGAAGG GATACAATTC AAATTTGAAT
GTATCCCTTT CGAATATGAC AGAAAAAGCG AATTACCGCT TCTCTTACAC CCGTAACGAT
TACAAAGGTG TACAGATCGG TGGTGATCAG CAGCGTAATA CTTTCAACCT GAACAGTACT
ATCAAGCTGC ACAACAAGGT GAGTTTAGAC GTGGTAAGTG GTTATGTAAA CACGAAGATC
ACCAACAGAC CATTACAGAT GGCGCGTATC TTCAATGACT TCGCCGGTTA CTTCGGTCGT
CAGGAAGACT TAGCGGTTGT GTTTGATAAA TACAAAACCA GCAAAGGTTA CAAATATGTT
ACGCCTGAAA ATGCGGCACA GAACCCTGAT GAAGCTATCA AATATCCTAT CCGTGCTTAC
AACCTGCTGG ATTTCCTGTG GAAACAGCTG CGTAACCAGG AGATAGAAAA ACAGGATCGT
TTAATATCCA GTGTTACATT GAATATTGAC CTGGCAAAAG GACTGAGATT CCGTACCAGG
TTAGGTAATG ACTTTACCAG TGTGAACACT GAAACTAAAG AATACAACGA AAAGCCGATC
GCGTTCAATA GTGGAAGCAG TACCGGATCT TATGGCGTGG CAAAAGGCCG TTACAGCATT
GTGTACAGTG ACCAGTTACT GACTTTTGCA AGAGATGAAG AGAAAAGAGT ATTTGGTTAC
TCTGTGAGTG CAGGTCTCCA GACACGTAAA GAAACCTATA GTGATCAGGT GTCCACTACC
AATGGTGGTC TCGTAACCGC AAACTGGTTC AGTATCAATA ACTCCTATAA TATTCAGAAT
ACATCTGAGC GTCGTAGTGG TGCGTTTAAA TACGCATACC TGGGTATCCT GAACCTGAGT
TACATGAACT ACCTGTTCCT GGAAGGTACT GCCCGTCAGG AGTACTCTTC TACACTGCCT
CACAAGAACA ACAGTTATTT CTATCCTTCT GTGAACTCCA GCTTTGTGTT CACCGAAGCG
TTCCATCTGC CTACTATCTT CTCTTATGGT AAGGTACGTG CTTCCTACGG TCTCGTAGGT
AACGCTCCTC CTCCATTTGA GTCTAACGTT ACCTATACGC AGAAACCAAT TTCTACAACT
ACCGGTTCTA TTCCTTTGCT GATCGCACAG AGTGATTATG GTAATGAGCA GCTGAAATCA
GAGAAGAAAA CAGAGATAGA GATCGGTACA GAGGTAAAAA TGCTGGATAA CCGTTTTGGT
TTTGACATCT CTTACTATGA CAGTAAAGTA ACTGACCTGT TAATGCGTTT GAACGTTGCG
GTAAGTAATG GTGCTAAAAC AAGGATCACC AACGTAGGTA AACTGCACAG TAAAGGTATC
GAGGTAGCGT TGACTGGTAC TCCGGTAAAA GGTAAAATTA CCTGGAATAC CCGTCTGAAC
TTTGCGAACA GTACTTCCAG CATAGAGGAA CTGACGCCAG GTGTATCTCA GATCGTAATG
CTCTTTGCAT CCAGAGATGC GGTGAAAGTA GTAGCTGAAA AAGGCCAGCC TATCGGTAAT
ATCTACATGT ACCCACGTAA GAGAGACGAT AAAGGAAACC TCGTTATCAC TGATAATGGA
CTGTATGATG TTGATATCAC CAAGTATGAG AAGAAAGGTA ACCTGTTGCC TAAAATCGTT
GGTGGTTTCG CGAATACTAT CACTTACCAC AACTTATCAC TGGACTTCAT GTTTGACTAC
CGTTTCGGTG GTATGATCGT TGCTACGCCG TTTAAATTCA TGACAGCTGC CGGTATGTAC
GAGAACACAC TGCAGTACCG TGATGAAGCG CATGGTGGTC TTCCTTACTA CCTGGATACT
GATGGTAAAA CAATGATTCA GTTGCCAAGT CACAATTCAA TTTCGCCAAA TGGTCCGGTT
TATCATGATG GTGTGATCCT GGATGGTGTG ACTAAGACTG GTGCGAAAAA TACCAAGATG
GTACAGGCTG GTTATTACTA CCTGAACCAG TTCAATGACT CTCCAACCGC CTGGAACGAA
GTGACTCTTT CAAAGAACGA TTACGTAAAA CTCCGTGAGG TAGTACTGGG CTACAACATT
TCCAAAGCAA CAGCTGCAAA ACTGCACCTG CAGAGTCTGC GTCTGTCTCT GATCGGAAGA
AACCTGTTGT ATGCATATAG AACTATGAAG AACCTGGATC CGGAAGCTCC AATGGGTAGC
AGCTGGTTGA AACAGGGTAT TGATGAAGGT TCTTCCGGTG CAACCCGTAG CTATGGTTTC
AGTCTTAACG CCAGCTTCTA A
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| Protein sequence | MNVVLGLVLT TSLNVLAKAS FATKITLNLR DVEFKKVLTV IESQSDYRFM FSNRNIPNDN
KVDINVKDAQ ITTVMDLILN NSGFTYQELS NNLIVIMPKG AMLKAIKVTG KVLDQTGEAL
IGASIKIKGT SDGVATDENG AFTISVPDDA VLVVSYVGFK TQEIPVSGKT AITVTLQPNQ
SIMNEVVVTA LGIKREQKAL GYAVSTITSE QITAAGATNF ASALYGKAAG VKITTAPGGA
TSAVNIQIRG VNSLNYNTQP LYVVDGVQIR NNNEKGAGGT NNTDYWSDNR IRGNGILDIN
PADIESLTVL KGASATALYG SDAASGVVVI TTKKGMKGRG LGVDLNYSHT AERVAFAPRY
QNEYGSGYDR TTAGANANAA GWVPIGTDGT VRPYFRAYAQ FGPKLDGQLV PWWDGSMHSY
SPQPDNYNQL FQKGYNSNLN VSLSNMTEKA NYRFSYTRND YKGVQIGGDQ QRNTFNLNST
IKLHNKVSLD VVSGYVNTKI TNRPLQMARI FNDFAGYFGR QEDLAVVFDK YKTSKGYKYV
TPENAAQNPD EAIKYPIRAY NLLDFLWKQL RNQEIEKQDR LISSVTLNID LAKGLRFRTR
LGNDFTSVNT ETKEYNEKPI AFNSGSSTGS YGVAKGRYSI VYSDQLLTFA RDEEKRVFGY
SVSAGLQTRK ETYSDQVSTT NGGLVTANWF SINNSYNIQN TSERRSGAFK YAYLGILNLS
YMNYLFLEGT ARQEYSSTLP HKNNSYFYPS VNSSFVFTEA FHLPTIFSYG KVRASYGLVG
NAPPPFESNV TYTQKPISTT TGSIPLLIAQ SDYGNEQLKS EKKTEIEIGT EVKMLDNRFG
FDISYYDSKV TDLLMRLNVA VSNGAKTRIT NVGKLHSKGI EVALTGTPVK GKITWNTRLN
FANSTSSIEE LTPGVSQIVM LFASRDAVKV VAEKGQPIGN IYMYPRKRDD KGNLVITDNG
LYDVDITKYE KKGNLLPKIV GGFANTITYH NLSLDFMFDY RFGGMIVATP FKFMTAAGMY
ENTLQYRDEA HGGLPYYLDT DGKTMIQLPS HNSISPNGPV YHDGVILDGV TKTGAKNTKM
VQAGYYYLNQ FNDSPTAWNE VTLSKNDYVK LREVVLGYNI SKATAAKLHL QSLRLSLIGR
NLLYAYRTMK NLDPEAPMGS SWLKQGIDEG SSGATRSYGF SLNASF
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