| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_7106 |
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| Symbol | |
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| ID | 8363298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 8892811 |
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| End bp | 8895267 |
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| Gene Length | 2457 bp |
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| Protein Length | 818 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644969239 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003126708 |
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| Protein GI | 256426055 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.385774 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACTATT TACGTGTTCT CTATACAGCT GTCTTTATCA GCTTACTTAG CTATTCATCC
GGATTTGCTA ATTTATACAA CGGTGACGAT GCCAATAATT CACTCAGCGG AACAGTGACT
GATAAAGCTT CTAACGGCCC TTTACCAGGG GCTACCGTTT ATCTGCCCGA TCTGCATATA
GGCGCTTCTG CCAACACACA GGGACAATAC GAACTCAAAA ACCTGCCAAA AGGTAAATAC
CTCGTGGAGG TGCACTATAT CGGTTACGCC GCTTTTACTG AAGTGATTCA GATCGATGGC
AGCACACACA AGGACTTCTC ATTATCTGAA ACACTGCTGG AAAAAAATGA AGTGGTGATC
ACAGGTGTTA ACCTGGCGAC AACCCTGAAA AAGACACCTA CGCCTGTAAG TGTTGTCAGA
AAGGAATACC TCGACGCTAA TATCTCCACC AATATCGTGG ACGCAATTGC TAAGCTGCCA
GGTGTGAGTC AGCTGACTAC CGGACCCGCC ATTTCCAAAC CATTCATCCG TGGTCTGGGT
TACAACCGCG TAGTAGTTGT AGGTGATGGT GTACGCCAGG AAGGACAACA GTGGGGTGAT
GAACATGGTA TTGAAATTGA CGATTATAAC GTAAGCAGGG TAGAAGTACT GAAAGGACCT
TCTTCACTGG TATATGGTTC TGATGCGCTG GCGGGTGTAG TGAATATCGT ACCTCCGGGC
GCCGTTGCTG CCGGACAGGT AAAAGGCAAT GTGGCTGCGA ATTATCTGAG CAATAACGGT
CAGATTTCCT ATCACGCAGA CATCGCAGGT ACTTCAAAAG GAGGCTTCAG CTGGAGCGCT
TTTGGTACCC AGAAATTTGC ACATGACTAC AAGAATAAAT ACGATGGCTA CGTATTTAAC
TCCAAGTTTA AAAATATCAA CTATGGTGGA AGTCTCGGTT TGAATAAACA ATGGGGTTCT
TCCATCCTGC GTTTCACTTC CTTTAACCAG GAACTTGGAC TGGTAGAAGG TGACCGGAAT
GAAAATGGTC AATTCATCAA GCCGATTAAT AACAATGGTC AGGAAGATGA AGCCGTTGCT
ACGAATGATG ATTTCAAATC TTACAGCATC GGCGTACCTA AGCAGAAAAT CACCCACAAC
AAACTGGTAT GGGATAATAA TCTCTATCTG CACAATGGGG GCCGTCTGGG ACTGACACTG
GGTTATCAGT GGAACCGTCG TAAGGAATTA GGGAATGTGC TGGAGCCGGA TGAACCGGAA
TTGTTCCTGA AATTGAACAC CTTTAACTAC GGTCTGAAAT ACTATTTACC GGAAATGAAT
GGCTGGCAGA CAACTATCGG CGTAAATGGT ATGCAGCAGA AAAATAATAT CGGAGGAGAA
GAATACCTGA TTCCTGCTTA TGACCTGTTT GATGCAGGCG TATTCGCAGT AACCAGCAAA
ACCTTTGATA AACTGACACT GAGCGGTGGT CTCCGTTTTG ACAACCGTCA TATGAACATC
AAAGGTCTGC AGTTGAATGA TGAAGGCGTA CCTGTTGACA ATGGCGGTGA AACGAAGTTT
TCTACTTTCG ATCGTAATTT CTCTAATGTA TCCGGAAGTG CTGGTATCAG CTATGCTGCC
AGTGAGCAGG TAACGCTGAA GCTGAATGCC GCCCGTGGTT TCCGTGCGCC TAACGTATCA
GAACTGGCGG CAAATGGCGT TCATGAAGGT ACCATCAAAT ATGAATATGG CAACAGTGAT
CTGAAGCCGG AAGTGAGTAC ACAGGGCGAC CTGGGTGTTG AGTTCAATTC ACAACACATA
TCACTGACAG CAAGCGTATT CTACAACCAT ATCAATAACT TCATTTTTGC CCGTAAACTG
GTGAGTGTTG CCGGTACGGA TTCTATTCCG GTAGATGACA ATGAAGATGG TTATGCTGCA
TTCAAATATC AGCAGCATAC GGCTAATCTG TATGGTGGTG AATTCATGCT GGATATCCAT
CCCCATCCGA TTGACTGGCT GCATTTTGAG AATACTGTTT CTTATGTACG CACTGCTATT
TCAGGTGGTA CAGATTCAAC GAAATATCTG CCTAATATTC CTGCAGCCCG CTGGTTATCT
GAGCTGAAGG GCAATTTCAA GAAAGTAGGT GGTGTGATGC AGAATGCATA TGTAGGTGTA
CAGATGGATA GAACATTTGC ACAGAATGAT ATTTTCTATG CTTACCAGAC AGAAACAGCT
ACATCGGGTT ATACTTTATT AAATGCAGGT ATAGGTACTG ACTTCATTAA CAGGAAGAGT
AATAAAGTGT TATTCTCTCT GCACCTGGCA GCTAACAACC TGACAGATGT AGCTTATCAG
AATCACCTCA GCCGCCTGAA ATATGCTGCT GTAAATGAAG TGACAGGCAG AAGCGGTGTG
TATAATATGG GGAGGAACTT CAGTGTGAAG GTAGTGGTAC CGATTGATTT TAAATAA
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| Protein sequence | MHYLRVLYTA VFISLLSYSS GFANLYNGDD ANNSLSGTVT DKASNGPLPG ATVYLPDLHI
GASANTQGQY ELKNLPKGKY LVEVHYIGYA AFTEVIQIDG STHKDFSLSE TLLEKNEVVI
TGVNLATTLK KTPTPVSVVR KEYLDANIST NIVDAIAKLP GVSQLTTGPA ISKPFIRGLG
YNRVVVVGDG VRQEGQQWGD EHGIEIDDYN VSRVEVLKGP SSLVYGSDAL AGVVNIVPPG
AVAAGQVKGN VAANYLSNNG QISYHADIAG TSKGGFSWSA FGTQKFAHDY KNKYDGYVFN
SKFKNINYGG SLGLNKQWGS SILRFTSFNQ ELGLVEGDRN ENGQFIKPIN NNGQEDEAVA
TNDDFKSYSI GVPKQKITHN KLVWDNNLYL HNGGRLGLTL GYQWNRRKEL GNVLEPDEPE
LFLKLNTFNY GLKYYLPEMN GWQTTIGVNG MQQKNNIGGE EYLIPAYDLF DAGVFAVTSK
TFDKLTLSGG LRFDNRHMNI KGLQLNDEGV PVDNGGETKF STFDRNFSNV SGSAGISYAA
SEQVTLKLNA ARGFRAPNVS ELAANGVHEG TIKYEYGNSD LKPEVSTQGD LGVEFNSQHI
SLTASVFYNH INNFIFARKL VSVAGTDSIP VDDNEDGYAA FKYQQHTANL YGGEFMLDIH
PHPIDWLHFE NTVSYVRTAI SGGTDSTKYL PNIPAARWLS ELKGNFKKVG GVMQNAYVGV
QMDRTFAQND IFYAYQTETA TSGYTLLNAG IGTDFINRKS NKVLFSLHLA ANNLTDVAYQ
NHLSRLKYAA VNEVTGRSGV YNMGRNFSVK VVVPIDFK
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