Gene Cpin_6990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6990 
Symbol 
ID8363182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8755966 
End bp8756796 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content46% 
IMG OID644969123 
Productphospholipase/Carboxylesterase 
Protein accessionYP_003126592 
Protein GI256425939 
COG category[R] General function prediction only 
COG ID[COG4099] Predicted peptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0030979 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGACGGG ATTTTTTCAT TTTACCTACA CATATGAAAA GAAGAGCAAT TAACAGATTT 
ATTTATGTAC TACTTATTGC AGTATTGGGT AGTATAGTAG CCTGTTCTAA GCGGAATGAA
TCAGCGGTAC CCGGCGGAGG CAATGGAACA GACACCATTC CGGACCCTCC CAAGGAAGAT
GTTTTTACAC CACAGACGCC TGGCATTACC GTACAGACGG CCGATTACAA ACAAGGCAAC
ATCGCTGAAT ACCTGCTTTA TATTCCTGAC ACCTATAATG ACATGAAAAG TTATAAGTGG
CCGGTAGTGA TCTTCCTGCA TGGTGTGGGA GAGATAGGCA ATGATATAGA TGTGATCAGA
CAAGTAGGAT TGCCCAGGGT GGTGAAAGGA AAGCCGTTTG TGATGATTGC GCCACAATGT
ACTGCGGTGT GGTGGAATAC AGATGTATTG CAGCAGTTGT ATAAAGAAGT GTTGAAGAAG
TATCATGTGG ATTCTTCCAG GATTTATTTA ACAGGATTGA GCATGGGTGG TTTCGGAACC
TGGAACTGGG CGCAGACGAG TCCTGAGAAA TTTGCCGCTA TCGTACCGAT CTGCGGTATT
GGTACGCCAT CACAAGCTTG TGTACTGAAG CAGATGCCGG TATGGGCTTT TCATAATGCG
GATGATCCTA CGGTAACAGT GGCAGGATCC AGGGATATGG TAAATGCATT GAAATCATGT
GGGAGTAGTC TGGTGAAGTA TACGGAGACG CCCACCGGCG GGCATGATGC GTGGACGAAG
GCTTATGCGG ATACGGCTTT ATATAGCTGG ATGCTGAGAC AACATCAATG A
 
Protein sequence
MRRDFFILPT HMKRRAINRF IYVLLIAVLG SIVACSKRNE SAVPGGGNGT DTIPDPPKED 
VFTPQTPGIT VQTADYKQGN IAEYLLYIPD TYNDMKSYKW PVVIFLHGVG EIGNDIDVIR
QVGLPRVVKG KPFVMIAPQC TAVWWNTDVL QQLYKEVLKK YHVDSSRIYL TGLSMGGFGT
WNWAQTSPEK FAAIVPICGI GTPSQACVLK QMPVWAFHNA DDPTVTVAGS RDMVNALKSC
GSSLVKYTET PTGGHDAWTK AYADTALYSW MLRQHQ