Gene Cpin_6771 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6771 
Symbol 
ID8362963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8483049 
End bp8483795 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content46% 
IMG OID644968904 
Producthypothetical protein 
Protein accessionYP_003126373 
Protein GI256425720 
COG category[R] General function prediction only 
COG ID[COG3257] Uncharacterized protein, possibly involved in glyoxylate utilization 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATAT CAGCATTGAC GAGATCAGTA GTAACACGCA ATCATGCAGT GATATGTCCG 
GATGGCTATG TCAACAGTGT GGTACCCGGA TGGACCAATT GCCGCGTGAA TGTGATCATT
AATGAACAGA TGGGCGCAGG CCTCGGACAA ACATTGATCA CCGCAGAAAT AGGCACTGTC
ATTTCTGGTC ATACAGAAAC GTCACAGATC TTTTTTTATG TCATCTCCGG ACAATGCACC
GCCAAAGTAG ATGAAAATGA AAAGACCCTG CTCGGCGGAC ATTTTGTATA CGTACCTACC
GGTCATTCGT ACCATCTGGA CGAATGCACA ACAGGTACCC AGATCGTTAC TTTTCACAAA
GTATACGAAC CCCTCAAAGG ACATGAACAT CCACCATTTA TTTTCGGTAA TGCCGAAAAA
ATAGACGGTC CCGCCTTCCT GGGCGATCCG GCCCTGCGCT TACAGGTCTT GTTACCGGAA
GATCTTTCTT TTGATATGGC GGTGAATATC TTCACCTACG ACCCCGGCGG ACATCTGCCT
TTCGTAGAAA CACATATCAT GGAACACGGA TTACTCTACC TCCAGGGACA GGGCGTCTAT
ATGCTGGATC ACAAATGGTA TCCGGTTCAA AAAGGCGACG CTATCTGGAT GGCGCCTTAT
TGCCAGCAAT GGTTTACTGC TATGGGAAAA GAACCTGCCG TTTACATCTA CTATAAGAAT
GTAAACAGGT TCCCCACTAC TCTATAA
 
Protein sequence
MKISALTRSV VTRNHAVICP DGYVNSVVPG WTNCRVNVII NEQMGAGLGQ TLITAEIGTV 
ISGHTETSQI FFYVISGQCT AKVDENEKTL LGGHFVYVPT GHSYHLDECT TGTQIVTFHK
VYEPLKGHEH PPFIFGNAEK IDGPAFLGDP ALRLQVLLPE DLSFDMAVNI FTYDPGGHLP
FVETHIMEHG LLYLQGQGVY MLDHKWYPVQ KGDAIWMAPY CQQWFTAMGK EPAVYIYYKN
VNRFPTTL