Gene Cpin_6703 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6703 
Symbol 
ID8362894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8399974 
End bp8400375 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content44% 
IMG OID644968836 
Producttranscriptional regulator, HxlR family 
Protein accessionYP_003126306 
Protein GI256425653 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACGT ATGAAAGAAA AACCCCCGAG GATCTGGACT GTGGTATTAC CGTGTTTATG 
AAAGTACTCG GCGCTAAATG GAAACCCTGC ATTGTTGACC TGATTAACCG TGGCTACAAA
AGACCCAGCG AAATACAAAG GAAATTGATC ACTGCCACCC CAAGGGTAGT AGAAATGCAA
CTAAGCGAAC TGGAAATCTT CGGTATTCTC AGTAAGAAAG TACACAAAGG GTTCCCCCTG
CACGTAGAAT ACTCATTGAC AGCTATGGGA CAAAGCATTT TGCCCGTTAT TTTATCAATG
GACCAATGGG GAGCTACTTA TTCGGATAAA GTCAAAAAGG TCGTCAACGG AAAGACAAAT
ACCCCTCAAT CCTTACCCTG CCTGCATCCT GTTACCGAAT AA
 
Protein sequence
MQTYERKTPE DLDCGITVFM KVLGAKWKPC IVDLINRGYK RPSEIQRKLI TATPRVVEMQ 
LSELEIFGIL SKKVHKGFPL HVEYSLTAMG QSILPVILSM DQWGATYSDK VKKVVNGKTN
TPQSLPCLHP VTE