| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6487 |
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| Symbol | |
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| ID | 8362671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 8148053 |
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| End bp | 8149078 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644968615 |
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| Product | Peptidoglycan-binding LysM |
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| Protein accession | YP_003126092 |
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| Protein GI | 256425439 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.577671 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.707539 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAATTG CGGGACTTGT ATTATGTGTT GCCGGTGGAG TACAGGCACA GGACAGGGTC
CAGGTACAGG GTACCTCTCC CGATCTGTAT GTACTGCACA CTGTAAAGAA AGGAGAAACT
CTTTACAGCC TGGGCAGGTC CTACAGTTTG TCTCCGAAAG AGATTGCAAG CGAAAACAAT
ATCTCAGCTG AACAAGGTTT GCAGCTGGGA CAATCTGTAA AGATCCCCTT AAACAACACC
AATTTTTCAC AGAAAACAGA TGCAGGCGGA ACACCTGTGT ATCATAAGGT AGAGGAAAAA
GAAACCCTGT ACCGTCTCAG TGTGAACCAT AACAAGGTAT CACTGGATAA TATCCGTCGC
TGGAACAATA TGACAGGTGA TGGTTTACAG AAAGATGGAT TCGTTATCGT CGGTTATCTG
AAAGGAACAG GTATTCCTGC TTCTGCACCG GTAGCCAGCA ATCCATCCAC TACACCAGCT
CCTGCTACCC ATCCGGTAAG CACACCACCA GCTACGACAC CAACGCCGAC GCCGTCCACA
CCAGCGCCAT CAACGCCGGT AGCGACTACG CCTGCGGCAG GTACTACGCC CGCTCCTCCG
GTAGCAAAAC CAGATCAGCA GGCGCCGCCA GAACCAGCTA CTACCACACC AACGCCGGCT
CCTGCTACCA ATAGCGGTGC TACTAAACCA GCTCCGGCAG CCAGTGCAGG ATCTTCTTTC
GAGCAGCTGT ATAACCAGCA GACAAGCAAT GGGAAGAGTG TGACTGCTGA AAAAGGCCCG
GGCGGATGGT TCAAGAGTAA CGCCAGCCCC GGTAAATATT ATGCCTTGCA CAATACAGCG
CCAAGAGGTA CGATTATTAA AGTGACCAAT CCGCTGAATG GTAAGTTCAT CTATGCTAAA
GTACTGGAAG CCATTCCACA GATCAAGCAG AATGAAGGCC TGATCATTAA ACTTAGTGAT
TCTGCTTTGG AAGCACTGGG TACAAACGAG GCGAAATTCT ACTGCCAGCT GAACTACGAA
GAATAG
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| Protein sequence | MTIAGLVLCV AGGVQAQDRV QVQGTSPDLY VLHTVKKGET LYSLGRSYSL SPKEIASENN
ISAEQGLQLG QSVKIPLNNT NFSQKTDAGG TPVYHKVEEK ETLYRLSVNH NKVSLDNIRR
WNNMTGDGLQ KDGFVIVGYL KGTGIPASAP VASNPSTTPA PATHPVSTPP ATTPTPTPST
PAPSTPVATT PAAGTTPAPP VAKPDQQAPP EPATTTPTPA PATNSGATKP APAASAGSSF
EQLYNQQTSN GKSVTAEKGP GGWFKSNASP GKYYALHNTA PRGTIIKVTN PLNGKFIYAK
VLEAIPQIKQ NEGLIIKLSD SALEALGTNE AKFYCQLNYE E
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