Gene Cpin_6443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6443 
Symbol 
ID8362627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8095738 
End bp8096916 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content47% 
IMG OID644968571 
Productacetyl-CoA acetyltransferase 
Protein accessionYP_003126048 
Protein GI256425395 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGAAG TATTTATAGT TTCAGCAGTG CGTACCCCCA TTGGTTCTTT TAACGGCGCA 
CTGTCAGCCC TGTCTGCGAC ACAACTGGGA TCTATCGTTA TGAAAGCAGT ACTTGAAAAA
GCGGGTGTAC CGGCAACTGC GGTCAACGAG GTATATATGG GGAATGTGCT CAGTGCCAAC
CTTGGACAGG CTCCTGCCAA TCAGGCGAGT ATTTACGCTG GTATTCCGAA CAATGTTCCT
TGTACGACTG TCAATAAAGT TTGCGCTTCT GGTATGAAAG CCATTATGTT AGGCGCACAA
AGCATCCTTT CCGGTGATAA TGACGTAGTT GTGGCCGGCG GTATGGAAAG TATGAGTAAT
GTACCTTATT ATCTGGATAA AGCCCGTAAT GGCTATAGAC TGGGACATGG CGCTGTGACT
GACGGCATTA TCAGGGATGG TCTGTGGGAT CCTTACAAGG ATTTTCACAT GGGCAACGCA
GCAGAGCTTT GTGTGACAGA ATATAAGATC ACCCGTGAAG AGCAGGATGC TTACGCTATC
CAGAGTTATA AAAGGTCTGC CGAGGCTACC GAAAAAGGAT ATTTCAAAAA TGAGATAGTG
CCTGTTGAAG TGCCTGGCAA ACAGGTGGTT ACAGTAGCGG AAGACGAGGA TTATAAAAAA
GTGAACTTCG ATAAGATCCC TACGCTCAAG CCTACTTTCC AGAAAGATGG TACGATCACT
GCTGCCAATG CTTCTAATCT GAATGATGGT GCTGCCGCGG TATTACTGGT AAGCGGCGAG
AAACTGAAAG AACTGGGTCT GAAGCCACTG GCGAAGATCA TTAGCTTTGC GGATGCTTCT
CAGGCGCCTG AATGGTTTAC TACCACACCG GTAAAAGCGG TAACCAAAGC ACTGGAAAAG
GCAAAACTGA CGGTAGCGGA TATGGACTTT GTGGAAATCA ACGAGGCATT TTCCTGCGTA
CCGATTGCAA ATGAACGGGA TCTGGGTATT CCTGAGGATA AAGTGAATGT ATGGGGAGGA
GCCGTTTCGC TGGGTCATCC TATTGGCTGT AGCGGCGCAC GTATTGTGGT AACGCTCAGT
TCTATCCTCA ATCAGCATAA TGCCCGTTAT GGCGTGGCTG GTATTTGTAA CGGGGGAGGA
GGAGCGAGTG CGATCGTGAT TGAGGCAATT AAGAATTAG
 
Protein sequence
MKEVFIVSAV RTPIGSFNGA LSALSATQLG SIVMKAVLEK AGVPATAVNE VYMGNVLSAN 
LGQAPANQAS IYAGIPNNVP CTTVNKVCAS GMKAIMLGAQ SILSGDNDVV VAGGMESMSN
VPYYLDKARN GYRLGHGAVT DGIIRDGLWD PYKDFHMGNA AELCVTEYKI TREEQDAYAI
QSYKRSAEAT EKGYFKNEIV PVEVPGKQVV TVAEDEDYKK VNFDKIPTLK PTFQKDGTIT
AANASNLNDG AAAVLLVSGE KLKELGLKPL AKIISFADAS QAPEWFTTTP VKAVTKALEK
AKLTVADMDF VEINEAFSCV PIANERDLGI PEDKVNVWGG AVSLGHPIGC SGARIVVTLS
SILNQHNARY GVAGICNGGG GASAIVIEAI KN