Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_6315 |
Symbol | |
ID | 8362497 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 7955229 |
End bp | 7956167 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644968442 |
Product | NmrA family protein |
Protein accession | YP_003125921 |
Protein GI | 256425268 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATATTA TATTAGGCGC GTCAGGACGG GTCGGTTCTG GCATAGTATC CCATCTTATC CAACGCAGAG AGTCTGTTAA AGGTATTATC AGAGATGCAA AGAAAGCCCC CCAACTGAAA GCACTCGGCG CAGATGTAGC CATCGCTGAC GCCAATGATC TTCCCGCACT GGTGGCTGCT TTTCAGGATG GCAGTACGCT TTTTGCCATT ACCCCCGAGA CACATCATGA AAGGAATGTG ATAGGAGAAA CAATCGATAT TCTGGACAAC TACAGGAAAG CGCTGGCTAA CTCCCCTATC AAGCGACTTG TAGGTCTGTC CTCTATTGGC GCGCAATATG AAACAGGTAC AGGTAACCTG GTAATGTCCT ATCTGCTGGA GCACGCTTTT ACTGCTATGC CTGTCAAACA GACATTTGTA CGCCCTTCCT ATTATTTCAG TAACTGGATG ATGTACCTGG AATCAGTACA GGAGAAAGGC ATTTTACCAA CATTTTTCCC GGTAGACCTT GCACTTCCAA TGGTATCGCC TGAAGAAGTG GCAGCATTTG TTGCCAATGT TATACAAAAA GAGGACGAAG ATGGGAAAAT ATATGAACTC ACTGGTCCTG CGATGTATAG CAGCAATGAT GTGGCAGCTG CATTTTCAGC CGCATTAGGT AAGGAGGTAA AGGCAGTACA GATCCGCAGA GAAGACTGGG AAAGTACCTT ACATGGTATC GGATTTACAC CGGATGCTAT CAGAAACTTC GTTGAAATGA CACAGGCTGT CATCTCCGGT AAGGCAGCAC CAGAAAAAAA AGGCACAATA CAGGTCGAAT TGAAAACGAC GCTGGAAGCG TATGTAAAAG CACATATCCC TGCACAGGCA ACTGTGACTC CCGTTACGAA AACGACTAAA ACAAGAAAGA AAACAGCTGG CAAAAAAGCT GCAGCCTGA
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Protein sequence | MHIILGASGR VGSGIVSHLI QRRESVKGII RDAKKAPQLK ALGADVAIAD ANDLPALVAA FQDGSTLFAI TPETHHERNV IGETIDILDN YRKALANSPI KRLVGLSSIG AQYETGTGNL VMSYLLEHAF TAMPVKQTFV RPSYYFSNWM MYLESVQEKG ILPTFFPVDL ALPMVSPEEV AAFVANVIQK EDEDGKIYEL TGPAMYSSND VAAAFSAALG KEVKAVQIRR EDWESTLHGI GFTPDAIRNF VEMTQAVISG KAAPEKKGTI QVELKTTLEA YVKAHIPAQA TVTPVTKTTK TRKKTAGKKA AA
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