| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6300 |
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| Symbol | |
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| ID | 8362482 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 7936328 |
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| End bp | 7940095 |
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| Gene Length | 3768 bp |
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| Protein Length | 1255 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644968427 |
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| Product | histidine kinase |
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| Protein accession | YP_003125906 |
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| Protein GI | 256425253 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.396058 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTGGATA TCAAAGAAAT AAGGATTTTT TTCATCCGCC ATGGCTATCT CCTGATCATC
GCTGCCTGGT TATTCACTTT TTCTTTCCTT TTCAGCAATT ACTGGTCTTA CTATTCCTCT
CCGCAGGGGG TAAAACGCAG TCTGGAGAAA AGTATCAGGG AAAGGGAAGA CGCCTTTCAG
GAACTGTCAA CAGATAGCAC GCTGATAGAA CATATTTTCG CGCGGGATCA TGACGAGAAA
GAGGAAAAAC TGCTCTCCAA ACAAAGCTTC TATGTCTTTG CATATGATAG CAGCACGGCC
AGCCGCTGGC TGGTATACTG GAGCACCAAC CTCGTATTAC CGGATGAATG GCAGGCGCCC
CTGCAACCGG GTATCCGTTT CCTCAAACTG AAAAACGGCT ACTATGAGGT GATCTGTAAA
AAGGTGCAGC CACAACAGGC CGGACACGAA CGTTACCTGA TGGCGGCTAT ACCCGTTATG
ATGGAATACA ACCTCAGTAA CAACTATCTT GTCGATCATT TCTTTGATAA ACCGGCCCTG
GGAATGGAAT ATACCATTCA CCTGAAACCG CCCGGTATAC CGGTATTGAA CGGGCAAAAC
CTGATCCTTT TCTATCTCTA TTACGATCGT ACACTGGATA CGGGACCGCC TAATCTGCTC
AGTGTCATAC TGCGCGTACT CGGTTGTATC TGTGTGCTGA TATTTGTTAA TCTCTTTGCC
ACTACACTGG CCCGGCAGAA GAATCCGTTG TATGGCTTCT TTTTCCTGTT TACCATTATC
ATCGTCTGTC GGACGCTGAG TTATCTTTAC CCGTTTCCAT TCAACCTGCG TTCACTCAAC
ATATTTACAC CGCTGATCTA TGCGAAGGAT GAAGTGTTCC GCTCATTGGG CGACCTTTTA
CTCAACGTAT TACTCGGGTT CTGGTTATTA CTGTTCTTCC GTGAACACGT AAAGACCATC
AAGGCGCCAC GGGTGACTAA TCGCGGTCAG CAACGTGTGG TGATCATCCT GGCCAGTTTC
ATTATGTACC TGGTAGGAGA ATTCCTGTCA CAACTCATTC AGAGTCTTGT AATTGACTCA
AGAATCTCGT TTGACGTGGC GAATCCTTTC AGTCTGAATG AATACAGTAT TATCGGCTTC
ATCATACTTG GATTTATCTC ATTCAGCTTC CTGTTTTTCT CACAGATCAT CAACTATCTG
CTGAATGAGC TGACGAACTT CCGCCACCGT ACCAAATATC TGTTCCTGGG TATTGTCGGT
ATCGTCTGGC TGGCTTTCCG TGTACAGAAC CCGGATATCT ACTATTCGGT AGCCATGGTC
ATCTGGCTGA TCATCTATGT GGTGCTGCTG GATGTGTTAT CCTACCGCTT TGAGAACAGT
CTGGCCACTG TTCCATTTCT CTTCTGGCTC TTCCTGCTGA CGATCACTAC GTCTGCTGTA
CTCGTATATT ACAACGACAA AAAGGAGGTT AGTCTGCGGG AACGCATGGC CGTGGAATTA
TCCAAACAAA AAGACCCGTA CGTAGAAATG CTGCTCACCG ATGTGACGCG GCAGATGGAA
GAAGACGAGC TTTTGCAAAC GTTTTTCCAG CAAAGCAGTG CAGGCAGATC AACCCAGCGG
GGCATAATGG ACGAACTGAA ACAGAAATAT TTCAAGGGAT ACCTGGCCAG ATTTAATGTT
AGTTTTTATC CTTTTAACGA GTATTTCGAA CCCCTTTACG GTGGAGATAC CTCTTCATTT
CCGACGCTCA GCCGGCGTAT GCTGATGGGC TCAGAACTGA TCGGAAATGA GTTGTATTAC
AACGAACGCA GTTATAACGA TTACAGCTAT ATCGGTCGTA AAGATTTCTA CCGGAATAAT
GCACCTGCAG GCTATCTCAT ATACGAACTG ACGCCTGCGG TTGTCAATAC CCAGCGACTG
TATCCTGAAC TGCTGGTAGA CGGAGATATT TATGATCCGG AGAAAGAATC TTCCACTGCT
TATTCCTACG CGATTTATGA CCAGGGAGAA CTGGTGAGTA ATAACAACGA TTATGCTTTC
CCGGTCAAAT TATACGCATC AGATATACCC AAAGATGAGA TCACACTGGA TTATCATAAA
GGCTTCTCCC GCCTGATCTA TAAGGCATCA AAGGACAAAG TGGTGATCGT GGTGAAGGAA
AGCAGAAGTT TTGTGGAATT CATCACCCTG TTTGCGTGGA TGTTCTGTCT TTTCCTGTTG
ATCATCGCGA TTTACAGGGT GCTGGATCTG ATGGTAAAAG CGAGAATGCG TATCGGTAAT
CTGAAAACGT TGATCAATAT CAGCATCCGT AAAAAGGTGC ATGGTACGAT CATCTTTATC
GTTGTATTTG CCTTTATCAT CCTGGGTCTG ACGACGATCC TCTTCTTCAT CGACCGTTCT
GAAAGAGAGA ATAAAGAGCG ATTGAGCCGT ACGATTAATG AGGTGTCCCG CGATGTGGAA
AAGGTATTCG AAAACCAGCG TATGTTCGAT GACCTGGAGG ATCTGTATGA TCCGATATTC
CAGGCAGGGC TGACAGCAGA GATGGCAGAA ATAGCAGATG AAAGAGCCCT GGACATCAAT
ATCTATGACC GGGATGGCAA TTTGCAGGTC ACTACACAGC CATTGATCAC AGAGAAAGGA
TTATTATCCA GGAAGATCAA TCCGGATGCC TTTCTGCAGC TTTATCGCGA ACCAAAGATC
CAGTGGATAC AGAAGGAGAA GATTGGCGGC ATGAAATACC TTTCCGGTTA TAAGCCTTTA
CGGAGCAGTA CCGGGGAGAT CTTTGCCTAT CTGAATGTGC CTTATTTCGC GACCCAGACG
GAGTTGAATC AGCAGATCTC CAACTTCCTG GTCGCCCTGA TTAATTTCAA TGCCTTTATC
TTCCTGATTG CGGGTTTACT GGCATTGCTG ATCACGAATT CCATTACCAA ATCCTTCTCG
CTGGTAACAG AAAAGCTGCG GCACGTGAAC CTTGGACAGC AGAATGACGA GATTGAATGG
GAAAAGGATG ACGAGATCGG GGCATTGGTG AAGGAATACA ATAAAATGGT GCGTAAACTG
GAGGTCAGCG CCGCCCGCCT GGCAAAGAGT GAAAGGGAAG GGGCCTGGAG AGAGATGGCG
AGACAGGTAG CCCATGAGAT TAAGAATCCG CTGACGCCGA TGAAGCTCAG TATACAATAC
CTGCAACGGG CCATCGACAA TGACGCACCA AACGTAAAGC AGTTGTCTAA AAACGTGGCG
CATACACTGG TGGAACAGAT AGAGCACCTG GCGAATATCG CATCCGATTT CTCGGCATTT
TCGCGTATTG ACGAGGCTAA CAGCGAGGTA TTGTTATTGA ATGAGGTGCT GCATTCGCTG
AGAGATCTTT ACCAGATCCA CGACAATTTC AGTATGCATT TCCCGCCACC AGGGAAGGCT
TTTTATGTAT TTGCCGATAA AACGCAGATG AATCGATTGT TTACCAATCT TTTGCAAAAC
GCGGTACAGG CATTACCGGA AGGAAGGGAA GGAAATGTGA CGATTGCCAT GACAGAGCAG
GAGGAAGGTT GGGTCGTTGT GAGTGTAGAA GACAATGGAG AGGGGATTCC ACCGGAAATA
CAGCCTAAGA TCTTCGTACC GAATTTTACC ACTAAAAACT CCGGTACCGG CCTCGGACTG
GCGATGTGTA AAAACATCGT AGAGCAGGCG AGGGGAGAGA TCTGGTTTGA AACGCAGTTG
ACCGTGGGTA CGACGTTTTA TGTGAGGCTA CCGTTGGAAA AGGTGTAA
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| Protein sequence | MLDIKEIRIF FIRHGYLLII AAWLFTFSFL FSNYWSYYSS PQGVKRSLEK SIREREDAFQ
ELSTDSTLIE HIFARDHDEK EEKLLSKQSF YVFAYDSSTA SRWLVYWSTN LVLPDEWQAP
LQPGIRFLKL KNGYYEVICK KVQPQQAGHE RYLMAAIPVM MEYNLSNNYL VDHFFDKPAL
GMEYTIHLKP PGIPVLNGQN LILFYLYYDR TLDTGPPNLL SVILRVLGCI CVLIFVNLFA
TTLARQKNPL YGFFFLFTII IVCRTLSYLY PFPFNLRSLN IFTPLIYAKD EVFRSLGDLL
LNVLLGFWLL LFFREHVKTI KAPRVTNRGQ QRVVIILASF IMYLVGEFLS QLIQSLVIDS
RISFDVANPF SLNEYSIIGF IILGFISFSF LFFSQIINYL LNELTNFRHR TKYLFLGIVG
IVWLAFRVQN PDIYYSVAMV IWLIIYVVLL DVLSYRFENS LATVPFLFWL FLLTITTSAV
LVYYNDKKEV SLRERMAVEL SKQKDPYVEM LLTDVTRQME EDELLQTFFQ QSSAGRSTQR
GIMDELKQKY FKGYLARFNV SFYPFNEYFE PLYGGDTSSF PTLSRRMLMG SELIGNELYY
NERSYNDYSY IGRKDFYRNN APAGYLIYEL TPAVVNTQRL YPELLVDGDI YDPEKESSTA
YSYAIYDQGE LVSNNNDYAF PVKLYASDIP KDEITLDYHK GFSRLIYKAS KDKVVIVVKE
SRSFVEFITL FAWMFCLFLL IIAIYRVLDL MVKARMRIGN LKTLINISIR KKVHGTIIFI
VVFAFIILGL TTILFFIDRS ERENKERLSR TINEVSRDVE KVFENQRMFD DLEDLYDPIF
QAGLTAEMAE IADERALDIN IYDRDGNLQV TTQPLITEKG LLSRKINPDA FLQLYREPKI
QWIQKEKIGG MKYLSGYKPL RSSTGEIFAY LNVPYFATQT ELNQQISNFL VALINFNAFI
FLIAGLLALL ITNSITKSFS LVTEKLRHVN LGQQNDEIEW EKDDEIGALV KEYNKMVRKL
EVSAARLAKS EREGAWREMA RQVAHEIKNP LTPMKLSIQY LQRAIDNDAP NVKQLSKNVA
HTLVEQIEHL ANIASDFSAF SRIDEANSEV LLLNEVLHSL RDLYQIHDNF SMHFPPPGKA
FYVFADKTQM NRLFTNLLQN AVQALPEGRE GNVTIAMTEQ EEGWVVVSVE DNGEGIPPEI
QPKIFVPNFT TKNSGTGLGL AMCKNIVEQA RGEIWFETQL TVGTTFYVRL PLEKV
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