Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_6120 |
Symbol | |
ID | 8362302 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 7717376 |
End bp | 7718251 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644968251 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_003125730 |
Protein GI | 256425077 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGGATG ACATAAAAAC CTTTTCACTC TCCAGACATA GCCGATTATT CTCTGTTCCT GACACGAGCA GAGAATATCT GTTTGTCAGA TCAGGTCAGC ATCCATACCA TGAAGAGCCC TACCGGGCAG AAAGTTATGC GATCGTATTT ATCAGGGAAG GCGGTGTAAG GCTCAATACC GGACTGGTAT CATGGGATGT GCACGCACCG GCTATTATTA CGCTTGGTCC TTCGGTTGTC CGTTTTTTCA CAAAAAGCAG CGACCAGCTG AATATGGATG TTATATTCTT CAAAGACACT TTTCAGCTCG AGAATCACGC AGACGTCTTT TTCCTCTCGC GGTATGAATT TTTCGACAAC AATGACCTTC ATGTACTGCC GCTGAAAGAG CCCTATGTCG CGAAATTCAG TAAGATATAT GAACTGCTGG AGATGACACA GGACGCCGGC AGTTATGCCC AGCGTTTAAT CATCCGCAGT TACATCTTTG CGCTTATATT TGAAATTGAT GCCTGTCGCA GGATCTCTGT TTCGAATGTC CCCGCTTCGC AGGAACCAGA TCCCTTATTT ACAAAATTTA AACAGTTGCT CAGGCGTCAC TATATCCAGG AGCATAAACT TGACTTTTAT GCCCGCGAAC TTCATTTAAC GCCAAAGTCG CTTTCAGCGG CTATTAAAAA GCAATCCGGG CAATCTGCAG GGAAATGGAT TGATGACGCC ATCGCACTGG AGGCGAAAGT ATTACTCCAG AACAAAACTC TTACAGTAGC GCAGATAAGT AATATGCTGA ACTTCTCAGA GCAGTCCGTT TTCGGAAAGT TCTTCCGCAC CAATACTGGT ATGTCTCCTC TTGAATACCG CAAAAAATTC AACTAA
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Protein sequence | MMDDIKTFSL SRHSRLFSVP DTSREYLFVR SGQHPYHEEP YRAESYAIVF IREGGVRLNT GLVSWDVHAP AIITLGPSVV RFFTKSSDQL NMDVIFFKDT FQLENHADVF FLSRYEFFDN NDLHVLPLKE PYVAKFSKIY ELLEMTQDAG SYAQRLIIRS YIFALIFEID ACRRISVSNV PASQEPDPLF TKFKQLLRRH YIQEHKLDFY ARELHLTPKS LSAAIKKQSG QSAGKWIDDA IALEAKVLLQ NKTLTVAQIS NMLNFSEQSV FGKFFRTNTG MSPLEYRKKF N
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