| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6082 |
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| Symbol | |
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| ID | 8362264 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 7679579 |
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| End bp | 7681987 |
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| Gene Length | 2409 bp |
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| Protein Length | 802 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644968213 |
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| Product | protein of unknown function DUF214 |
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| Protein accession | YP_003125692 |
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| Protein GI | 256425039 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.165381 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAAGT ATTATTATAA GATAGCCACA CGCAATCTCT GGAGGAATAA GGGCTTTTCC
GCCATTACCA TTATGGGACT GGCTATCGGA CTAGCCACCT GCCTGTTGAT CGCGCTTTTT
GTAATAGATG AAATGCGCTA TGATGCTTAT AATAAGGATG CCAACCGTAT TTATCGTATC
AATGCCGACT TCCTGGTGAA TGGCAGCGCA TTCCGGGAAA GATATGCACC TTCCCAGTTT
GGCCCTGTAC TAAAACAGGA TTATCCGCAG ATTGAGGAGT ATGTACGCCT CGCTCAACAA
AGCAACATAC TGGTGAAAAA AGGGCAACAG ACCCTGCTGG AAAACAATGT CTGTTATGCC
GACTCCAGCA TCTTTGACAT GTTCGACCTG AAAATGATTG CCGGCGATCC ACTAACGGCC
CTGCGCAATC CTAACTCCAT GGTCATCTCC GAAAGCATGG CAAAGAAATA CTTCAATTCC
ATTGATGTCG TAGGGAAAAT CCTGGAAACA GATAATATCT ACACCTATAC CGTCACAGGC
GTCATCAAAG ACGTACCGGC ACAGGCGCAC CTGCACTTTG ACTTCCTCAG GGCAATGTCC
GGTCGGGAAG ACAGCAGAAA GACAGAATGG ATGTCCGATA ACTTCACGAC CTATGTACGG
CTGCGTCCGG GTATCACAGA AACACAACTG AATGGCTACC TGCGTCAGGC TACCAAAAAG
TATATGGAAC AGGATCTCCG CCGCCTTACC GGCAGCGGTA TGGAGGACCT GGAAAAGAAA
GGCGGACATT TTGGATACAA AGCAATTGCC CTGAGAAAAA TACATCTCTA CTCTGACCTT
TCCAGCGAAC AGGAAACCTC CGGCAACATA CAGTACGTAT ACATCTTTAT CATTACCGCC
ATCATCATCC TGCTGATCGC CTGTATTAAC TTCATGAACC TTTCTACAGC CCGTTCTGCA
GGAAGAGCCA AAGAAGTCGG ATTACGGAAA GTAATGGGCT CCGAACGCGG TACCCTCATT
ATACAGTTCC TCGCCGAATC TGTAATCACC AGTTTCTGTG CCATGCTGAT CGCCATCGTC
ATCGCCGCAC TACTGGTACC CTACCTGAAT GACCTCTCCG GCAAATCGCT GGCCATTACA
CCACTTGCAC TCACCTGGAT ACTACCGCTC TTACTGGTCA TCGTCGTTGT AGTCGGTTTG
CTCGCAGGTA GTTATCCGGC TTTCTTCCTG TCGTCCTTTG AACCGGTGAA AGTATTGAAA
GGTAAACTGG CCTCCGGCTT TAAAAACAGC TGGCTACGCA ATAGCCTGGT TATATTCCAG
TTTGCCGCAG CCATCCTGCT CCTGGTAGGT ACCCTGGTCA TCTACAATCA ACTGAGCTAT
ATCCGTAATA AACAACTGGG TTATGACCGT CAGCAGGTAT TAGTCCTGGA CAATACACAG
GCTTTGTGGA TCCATGCAAA AGGGTTTAAA GAAGAGGTAC AGAAACTGCC GGGAATAACT
GCAGGTACCA TGACCCGCAG TCTGCCGACC GAAACAAGTC ACGATACCAA TATCTTTTCA
AAAGATGCCG CCAGAAGCGA AGGCCAGGTA TTAGGTATCA ACGAATGGTA CATCGATACA
GACTACTTCC CTACACTTGG TATGCACATG GCCAGTGGCA GGAATTTTTC TCCGGATATG
CCGACTGATT CCAATACGCT TATCCTCAAT GAAACAGCAG CCAGACTCTT AGGCTTTAAT
GATATCACAG ACAAATATCT CTACAGGGGT AACCAGAAAA TGCAGGTGAT TGGTGTGGTC
AAAGATTTCA ATGCCGGTTC TTTACGCGAT AAGATCCCGC CAGCTGTCTT TACACTGGGA
GAATACACGT CCAGGATGGC ATTCCGCATC AATACCAATA ACATCCAGGC AACGATTAAA
AAAATTGAAG AACTCTATCA CGCAAGGCCA TCCATGCAGG GTCAGCCCTT CCATTATTCC
TTCATGGATG ATGATTTTAA TCGCCTGTAC CAGTCGGAAG ACCGCACCGG TAAGATCTTT
ATTTCCTTTG CGATTCTCGC CATTCTTATT GCGTCCCTGG GTGTATTCGG ATTGATCACC
TATGCGGCAG AACAACGTAA AAAAGAGATT GGTATCCGCA AGGTATTGGG GGCTTCTGTT
TCCAGTATTG TAGCAATGCT TTCTGCGGAT TTTGTCAAAC TCATTGCATT TGCAGCTGTC
ATCGCAGTGC CACTCTCCTG GTTACTGATG AATAAGTGGT TGCAGAGCTT CGCCTACCGG
ATCAATATCA ACTGGGTAGT CTTTGTATTA TCCATTTTAC TGATGGTCAT CGTCACACTG
GCGACTGTCA GTATCAAAGC CATCAGGGCA GCCACGATCA ATCCTGTGAA GAGTTTACGT
TCGGAATAA
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| Protein sequence | MFKYYYKIAT RNLWRNKGFS AITIMGLAIG LATCLLIALF VIDEMRYDAY NKDANRIYRI
NADFLVNGSA FRERYAPSQF GPVLKQDYPQ IEEYVRLAQQ SNILVKKGQQ TLLENNVCYA
DSSIFDMFDL KMIAGDPLTA LRNPNSMVIS ESMAKKYFNS IDVVGKILET DNIYTYTVTG
VIKDVPAQAH LHFDFLRAMS GREDSRKTEW MSDNFTTYVR LRPGITETQL NGYLRQATKK
YMEQDLRRLT GSGMEDLEKK GGHFGYKAIA LRKIHLYSDL SSEQETSGNI QYVYIFIITA
IIILLIACIN FMNLSTARSA GRAKEVGLRK VMGSERGTLI IQFLAESVIT SFCAMLIAIV
IAALLVPYLN DLSGKSLAIT PLALTWILPL LLVIVVVVGL LAGSYPAFFL SSFEPVKVLK
GKLASGFKNS WLRNSLVIFQ FAAAILLLVG TLVIYNQLSY IRNKQLGYDR QQVLVLDNTQ
ALWIHAKGFK EEVQKLPGIT AGTMTRSLPT ETSHDTNIFS KDAARSEGQV LGINEWYIDT
DYFPTLGMHM ASGRNFSPDM PTDSNTLILN ETAARLLGFN DITDKYLYRG NQKMQVIGVV
KDFNAGSLRD KIPPAVFTLG EYTSRMAFRI NTNNIQATIK KIEELYHARP SMQGQPFHYS
FMDDDFNRLY QSEDRTGKIF ISFAILAILI ASLGVFGLIT YAAEQRKKEI GIRKVLGASV
SSIVAMLSAD FVKLIAFAAV IAVPLSWLLM NKWLQSFAYR ININWVVFVL SILLMVIVTL
ATVSIKAIRA ATINPVKSLR SE
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