Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5846 |
Symbol | |
ID | 8362026 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 7427995 |
End bp | 7430448 |
Gene Length | 2454 bp |
Protein Length | 817 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644967985 |
Product | hypothetical protein |
Protein accession | YP_003125466 |
Protein GI | 256424813 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAATCTG TGTTCTATAA AAACAAAAAA CGCTTAAAGT GGCTCCTCCC TGCCTGTCTG CTGGGAGTTA CGAGCGCTCT TGCATTTTAT CCCGCCGATG AATGGCAGGA TAAGATCACA CAAGCCTTAG AACAGTACAG CAAACGCTTC CCCCAGGAAA AGGTTTACCT GCACCTGGAC AAAGATTACT ATGCCGCTGG GGAAACCATG TGGTTCAAAG CGTATGTTTT GCTACAAGGC CAACCATCTC TTTCTGCTAC CAACCTGTAC ATTGAACTGG TGGATAAAGC AGGAACTGTG GTTAACAAAA AACTGATCTC CGTGGGTGGC GCTACCGGCG CCGGAGCAAT CGAACTCCCG GACAATCAGA AACCAGGTCA ATATCAGCTG CGTGCATATA CTGCATGGAT GCTGAATTTT GACGCTGAAT ATCTCTTCTA TAAAAACATT GAAATATTTG ACCCTTCCAA GCAGATCGGT CCTGCCCAGA AACCGGCTAC GACTGACTTT GCTGTCAACT TCTTCCCGGA AGGGGGTAAC CTGATCGCCG GTGTTGCCGG ACGCGTTGCG TTCAAGGCAA TCGACCAGCA GGGTTATCCG CAGGAAGCAA ACGGTATCAT TCAGAACCTG AAAGGTGAAA CCGTTGCACA GGTTAAAACA TCCCGTGATG GTATGGGTAT GTTTGAACTG ACGCCTGCTG CCGGTGAAAC TTACAAAGCC CTGATGCAAA CAAGCAAAGG TCTGCAGAAA ACCGTTCTGC TGCCGGTGGT GAAAACTTCA GGGATTGGTC TGAAAGTATT CAACAAGAGT ACCCGTATCT TCTACCAGAC TTCTCCTGCG ACGAAAGACG ATCCGATGTA CAACAACCTG ATGATCGTTG CGCAGATGCA GCAGCACATC GTATACAAAG CGAAACTGAA TGCAGCGGAA GGTCAGATGA GCGGTTTCAT CCCTACCAAA GAATTGCCTT CCGGTATTCT GCAACTGACT GTCTTCAACA GTGACGGTTT ACCGCTGGCA GAAAGACTGG CTTTCGTAAG AAAGAACGAC TTCCTGTCAC TGGGTCTGCA GAACCTGGCC ATCAATACAC AACCAAGACA GAAGAACACC CTGGAGATCA AAATCCCGGA TACGATGCTG ACCAGCTTAT CCGTATCTAT CGTGGATGCT GACCAGATCG TAAAAGACCA GGATGAAAAC AACATCCTCT CTAACCTGCT GTTGACTTCT GATCTGAAAG GTTATATCTC CAATCCGTCA CAGTACTTCA AAGATGCGGA CCCTACCACC CTGTCAGGTC TGGATCTGGT AATGATGACA AACGGATGGA GAAGATTCAG CTGGGAAAAG ATCCTGCATA ACTATATGCC GGACATCAAA TACCCTTACG AGCAAGGCTT ACTGCTGAAA GGTATTGCTA CTACCAACAA AGGCGTTGCT CCGCTTTCTA ATGGTAAAGT TGACTTTATC CTGAAGCAGC CGATCGATAC TTCTACCGCA TTCTCTTCTG TTACAACCAA TGATAAAGGT GAGTTTGCAG TAGACCGTCT GCAGTTCGTA GATACCATCA ACGTATTCTA CCGCGCAAAC GATCCTAACA AGGCATGGAA AGACGTATCT GTGAAGTTTG AGCCACACTT CTTCGAAGCT GGCAATAATG TAACACTGCC TTATCCGTTC AGAAATACAC TGGAAATTGA GAACAAAGTA CTGAGTTCTT ACCTCTCCAC CGTATCTGAG AACACAGCAG TAACCAAATC CATGGCCAAT AAGCCGATTT TCCTGAAAGA GATCAACGTA CGTGAAAAGC GTCTTAGCAA AACAGAGAGT GTTGAAGCAC GTTACGCTTC AGGTATGTTC CATGCAGGCG ACGGTTACTC CTTTGACCTG ACCAGAGACG AAGCGGGTAG TCTGAGCATC TTCCAGTACC TGCAATCCAA AGTACCAGGT CTGACAGTAA ACCTGTCTGA CCCAACTACC GGCCCTTCAT TACAATGGCG TGGTGGTCCT CCGGTACTGT TCCTGAACGA AATGCCAACC AACATCAGCA TGCTGACTAA CATCAACATC GGCGATGTGG CGTTCATCAA GGTACTGCGT CCTACTTTCG TAGGTGGTTT CGGTGGTAGC TCTGGCGCTA TCGCGGTATA CACCAGAAAA GGCGGTGATA GCAAAAACGA TGTGGATACA CGTGGTTTTG AAAAATACAG AAAAGGTGGT TATAACATCG TGAAAGAATT CTATGCACCG GATTATACCG TTCGTAAAGA AATTCACATC CTCCAGGACA AGAGGCTGAC TCTCTATTGG AATCCGAACC TGGTTGCAGA TTCACTGACA CATACTGCAA AAGTCTCCTT CTATAACAAC GACTTTACAA GACGTTTCCG TATAGTAGTA GAAGGTATGG GTGAAGATGG TTCATTAGGA CACACGGAAC AACTGTTGCA ATAA
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Protein sequence | MQSVFYKNKK RLKWLLPACL LGVTSALAFY PADEWQDKIT QALEQYSKRF PQEKVYLHLD KDYYAAGETM WFKAYVLLQG QPSLSATNLY IELVDKAGTV VNKKLISVGG ATGAGAIELP DNQKPGQYQL RAYTAWMLNF DAEYLFYKNI EIFDPSKQIG PAQKPATTDF AVNFFPEGGN LIAGVAGRVA FKAIDQQGYP QEANGIIQNL KGETVAQVKT SRDGMGMFEL TPAAGETYKA LMQTSKGLQK TVLLPVVKTS GIGLKVFNKS TRIFYQTSPA TKDDPMYNNL MIVAQMQQHI VYKAKLNAAE GQMSGFIPTK ELPSGILQLT VFNSDGLPLA ERLAFVRKND FLSLGLQNLA INTQPRQKNT LEIKIPDTML TSLSVSIVDA DQIVKDQDEN NILSNLLLTS DLKGYISNPS QYFKDADPTT LSGLDLVMMT NGWRRFSWEK ILHNYMPDIK YPYEQGLLLK GIATTNKGVA PLSNGKVDFI LKQPIDTSTA FSSVTTNDKG EFAVDRLQFV DTINVFYRAN DPNKAWKDVS VKFEPHFFEA GNNVTLPYPF RNTLEIENKV LSSYLSTVSE NTAVTKSMAN KPIFLKEINV REKRLSKTES VEARYASGMF HAGDGYSFDL TRDEAGSLSI FQYLQSKVPG LTVNLSDPTT GPSLQWRGGP PVLFLNEMPT NISMLTNINI GDVAFIKVLR PTFVGGFGGS SGAIAVYTRK GGDSKNDVDT RGFEKYRKGG YNIVKEFYAP DYTVRKEIHI LQDKRLTLYW NPNLVADSLT HTAKVSFYNN DFTRRFRIVV EGMGEDGSLG HTEQLLQ
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