Gene Cpin_5761 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5761 
Symbol 
ID8361941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7334825 
End bp7335775 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content48% 
IMG OID644967902 
Producttranscriptional regulator, MarR family with acetyltransferase activity 
Protein accessionYP_003125383 
Protein GI256424730 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.673835 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.26689 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTTT ACGACACCAT CGGCAAACTT GCCATCGGCA GCAGGCTACG CCAGCTGACA 
GACATGATCA CTGAAGATGC AGCACAGATC TACCAGCAAT ACGGTATTGA CATGAACCCC
AAATGGTGGC CGGTTTTTTA CGTACTGTCC AGAGGAGAAG CAAATACAAT TACCGCCATT
GCCAAAGAAA TAGGCCACTC CCACCCCTCT GTGAGTAAAA TCATCAGTGA AATGGTGGAT
AAAGGGCTGG TAAAGGAAAA AAAAGACAAA ACCGACGGCC GCCGGAACAT GGTCAGCCTC
TCTCCCAAAG GAAAAGAGAT CACTGATAAG ATCGATGCAC AGTATACCGA CGTCAACGCC
GCCATTGAGG CCATTTCTGC CAATACGCGT AATGACCTCT GGGAAGCCAT TGGAGAGTGG
GAATTCCTGC TGGAGCAAAA AAGCCTGTTC CGCAGGGTAC AGGAGCAGAA AAAGGAAAGA
GAAAGCCGGA AAGTACAGAT CGTTGACTAT ACCCCCGCCT ATCAGCAGGC ATTCAAAGAA
CTTAACGTAG AATGGATCTC TACCTATTTT ACAATGGAAG AAGCGGATTA TAAAGCCCTT
GACAATCCAC AGGGATATAT TCTTGACAAC GGCGGCCATA TATTTGTTGC CCTCTATGAG
GACAAACCGG TAGGCGTCTG TGCCCTTATC AAAATGAAGG ATCCGGAATA TGAGTACGAA
CTCGCAAAAA TGGCCGTATC TCCTGCCGCA CAGGGTAAAA GCATCGGCTG GCTATTGGGA
AATGCCATCC TGGATAAAGC CAGATCGCTT GGCGCAAAGA AGGTATACCT CGAAAGTAAT
ACCATCTTAA AGCCCGCTAT CAGCCTCTAT CACAAACTGG GATTTGAACG CGTCATCGGA
CATACATCTC CTTACGAACG CTGCAATATC CAGATGGAGC GGGTATTATA G
 
Protein sequence
MSFYDTIGKL AIGSRLRQLT DMITEDAAQI YQQYGIDMNP KWWPVFYVLS RGEANTITAI 
AKEIGHSHPS VSKIISEMVD KGLVKEKKDK TDGRRNMVSL SPKGKEITDK IDAQYTDVNA
AIEAISANTR NDLWEAIGEW EFLLEQKSLF RRVQEQKKER ESRKVQIVDY TPAYQQAFKE
LNVEWISTYF TMEEADYKAL DNPQGYILDN GGHIFVALYE DKPVGVCALI KMKDPEYEYE
LAKMAVSPAA QGKSIGWLLG NAILDKARSL GAKKVYLESN TILKPAISLY HKLGFERVIG
HTSPYERCNI QMERVL