| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5442 |
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| Symbol | |
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| ID | 8361619 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 6952618 |
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| End bp | 6953724 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644967588 |
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| Product | putative transmembrane anti-sigma factor |
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| Protein accession | YP_003125072 |
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| Protein GI | 256424419 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.644837 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAACT TGGAAAACAA TGAAAAAATA CTGAAGATCT TCAGTAACAT CCGCTGTCTT
AACAGAGACC AGCTGCCCCG CTATCTGGAC GGCCGACTCA CGGATGTAGA GAAACACCTG
GTGGAACAAC ACCTGGTGGA CTGCGATCTG TGTTTTGATG CATTACAGGT ACTCCAGCAA
CAACAATACA GGGAAAAATA CCAGCCGCTG TCAGCTAGTA TGCTACAGTA TATCCGCAAC
AGCATCAAGC AGGTATCCCA TGCACATAAA GCCGAACGTT ATCAGCGCCA GGAACAGAAA
AAGGAAAGTT TCCTGATTTA TTTCTGGGTA GTCGCAGCCA TCGCTGCCGG CGCAGGTCTT
ATTTATCTTA TACAGCAACA GGATAAATTC AAGGCGCCTG TGACCAAAGC AATGGCCAGC
AATACGGAAG TTCCTGCTCC GGCGGTGAAC GCACCAGCCG TACAGGCAGC GGTTGTCACA
CCCGTACGGG CAGAAACAGC CGATACGCTC AGGCATCATC CGGCGCCACC GTCAGCTGCA
ACAACAGCGC CTGTTGCTCC TCCCGCAGCT ACGCCTGCCA CTGCCGTACC CAAGCCGGTC
GTAAAAGACT CCGTAAAAGC AAAAACACCG GCAGCTGTAC CCGTGAATAA GGATAGTGCG
AAAAAACAGG CCCCTCCTGC CACTAAACCG GCAGAGGTAA AGGAAACAGT CAAAACACCT
GCTCCGGAGC ATAAAGACAC GCCTACAGTC GCCAGGAAGA CGGATGATAA ACCAGATCCT
AAACCGGTTG CAAAAGAGAA GAAAGACGAC GATGATGATA AACCTAAACC CAAACCTGCT
ACAGAGTCAG CGCCCAGCGG CACAGATGAA TTCCTGTATA AGGCAGCCAT GGTCTATCAT
CAGCAGGGAG ACCTCAACGA GGCTATTTCC CGCTATAAAC ACCTTTCCGG CAGCAGTGGT
AAGTATGGCG AACTTTCACG TTACCAGCTG GCGGTATGTT ACCGTAGCAA AGGACAAACA
GGTAAGGCCA GACGTATGTT CAAGGAAGTC GTACGTATGA ACGGCAGCAT GAAAGACAAA
GCCCAGGCGG CCTTAGACAA TCTGTAA
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| Protein sequence | MSNLENNEKI LKIFSNIRCL NRDQLPRYLD GRLTDVEKHL VEQHLVDCDL CFDALQVLQQ
QQYREKYQPL SASMLQYIRN SIKQVSHAHK AERYQRQEQK KESFLIYFWV VAAIAAGAGL
IYLIQQQDKF KAPVTKAMAS NTEVPAPAVN APAVQAAVVT PVRAETADTL RHHPAPPSAA
TTAPVAPPAA TPATAVPKPV VKDSVKAKTP AAVPVNKDSA KKQAPPATKP AEVKETVKTP
APEHKDTPTV ARKTDDKPDP KPVAKEKKDD DDDKPKPKPA TESAPSGTDE FLYKAAMVYH
QQGDLNEAIS RYKHLSGSSG KYGELSRYQL AVCYRSKGQT GKARRMFKEV VRMNGSMKDK
AQAALDNL
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