6 homologs were found in PanDaTox collection
for query gene Cpin_5442 on replicon NC_013132
Organism: Chitinophaga pinensis DSM 2588



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013132  Cpin_5442  putative transmembrane anti-sigma factor  100 
 
 		 368 aa  754    Chitinophaga pinensis DSM 2588  Bacteria  normal  0.644837  normal  1 
 
 
-
 
NC_013132  Cpin_6666  hypothetical protein  34.78 
 
 		 277 aa  190  4e-47  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013132  Cpin_5444  putative transmembrane anti-sigma factor  39.71 
 
 		 118 aa  52  0.00002  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0459654  normal  1 
 
 
-
 
NC_011899  Hore_03980  putative transmembrane anti-sigma factor  40.38 
 
 		 390 aa  45.1  0.002  Halothermothrix orenii H 168  Bacteria  decreased coverage  0.00000793446  n/a   
 
 
-
 
NC_008554  Sfum_1326  hypothetical protein  44.74 
 
 		 465 aa  44.7  0.003  Syntrophobacter fumaroxidans MPOB  Bacteria  hitchhiker  0.000243968  hitchhiker  0.00621187 
 
 
-
 
NC_009523  RoseRS_3871  laminin G, domain-containing 2  30.83 
 
 		 1159 aa  43.9  0.004  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
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