Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5399 |
Symbol | |
ID | 8361576 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 6906241 |
End bp | 6907452 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644967546 |
Product | N-acylglucosamine 2-epimerase |
Protein accession | YP_003125030 |
Protein GI | 256424377 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2942] N-acyl-D-glucosamine 2-epimerase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0761169 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAATTGGA CATCAGACGA AAAACAACAG CTACCAGTCA ACACGCTGAA ACAGGAACTT TTACAGGAGC TTAAACGTAT ACTCGTTTAC TGGACGACTG AAACTGTAGA CGAGCGCAAT GGCGGTTTTA TAGGCCGTAT CTCCGCTCAC AATGTAAAAG ACCCTTATGC CGTCAAAGGA AGTGTGCTCA ATACCCGTAT ACTCTGGACA TTCTCTGCAG CTTATAATCT GTTAAAGACT GACCAGTATC TTACATTGGC TAATCGCGCC TGGGATTACC TCTATGCTCA CTTCGCTGAT AAAGTGCATG GAGGTCTTTA TTGGACGGTG GACTATACCG GTAAAGCAGT CGATGGCAAA AAGCAGGTCT ATGCCATTGC ATTCGGCGTA TATGCCTGCA GCGAGTACTT TAAGGCAAGC AGAAACGAAA CAGCTAAACA AACTGCGATA GCATGGTACC ATGCTATCCG TCAGTATGCC TACGATAAGA TATACGGCGG CTATATAGAA GCCTGTACGC AAGACTGGCA ACCACTATCT GATCTTCGGC TGAGTCTGAA AGATGCGAAT GAAAGAAAGT CCATGAATAC ACATCTGCAT GTGCTGGAAG CCTGGACTAC CTTATATGAG ATCTGGCCGG ATGAACAACT GAAAGCAGAT ATCCTGGAAT TACTGATGCT TTTTGACAAG CAGATCATTC ATCCCACTAC ACACCATTTG CAATTATTCT TCACGGACAA CTGGACGGTG AAAAGCACCT TGATTTCTTA TGGCCATGAT ATAGAAGCAG CATGGCTGTT ACTGGAGGCG GCAATTGCAG TTGGTGATGA ACAGGAGCTC AGTCGTTTCC GTGTCCGCGC CATCAACCTG GTAAGAGCCG CCCTGAAAGG CATGGATAAA GACGGTGGCC TCTGGTATGA ATACGATACT GCTGAGCAAC ACCTGATAGC AGAAAAACAC TGGTGGCCAC AGGCGGAAGC CCTGGTAGGA CTGGTCAATG CCTGGGAACT AAGCGGCGAT CCTTACTACC TGGATAAAGC GATGGCCAGC TGGCAATTTA TACAACAGTT CCTGCTGGAT AAAACAGACG GAGAATGGCA TTGGGGCGTC GGTCTCGACG GCAAGCCGAT AGAAGAAGTA AAGGTAGGAT TATGGAAGTG TCCCTATCAT AATGCGAGAG CATGCATGGA GGTCGTGAAG CGTTTGAAGT GA
|
Protein sequence | MNWTSDEKQQ LPVNTLKQEL LQELKRILVY WTTETVDERN GGFIGRISAH NVKDPYAVKG SVLNTRILWT FSAAYNLLKT DQYLTLANRA WDYLYAHFAD KVHGGLYWTV DYTGKAVDGK KQVYAIAFGV YACSEYFKAS RNETAKQTAI AWYHAIRQYA YDKIYGGYIE ACTQDWQPLS DLRLSLKDAN ERKSMNTHLH VLEAWTTLYE IWPDEQLKAD ILELLMLFDK QIIHPTTHHL QLFFTDNWTV KSTLISYGHD IEAAWLLLEA AIAVGDEQEL SRFRVRAINL VRAALKGMDK DGGLWYEYDT AEQHLIAEKH WWPQAEALVG LVNAWELSGD PYYLDKAMAS WQFIQQFLLD KTDGEWHWGV GLDGKPIEEV KVGLWKCPYH NARACMEVVK RLK
|
| |