| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5278 |
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| Symbol | |
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| ID | 8361455 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6691494 |
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| End bp | 6694985 |
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| Gene Length | 3492 bp |
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| Protein Length | 1163 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644967426 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003124910 |
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| Protein GI | 256424257 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.054683 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.154876 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAAAA GTACAAATAA GCGGGGAGGC CCGCTAGGGA ATTGCTGTCC GCAACTGAAA
GGGATCATCA GGAATGCGGG GCTGCTGGTA CTGTTATTCT TTACTGCATT TATGCCTGCT
GTTTATGCGC AAACAGGCGA ACAGAAGCTG GACATCTCCA TTGAGGCACA GCCACTGAAA
GATGTATTTC AGTTTATTGA GAGGAACACT TCTTTCGTCG TGAATCACAG TGAAGACGAA
ATAAATACCG CTGTGCGCGT GTCGGTAAAC CTGAAAGGCG CTACTGTAAC TGAAATATTG
AGAGGGGCAC TGCGTGCTAC CGAATACGAA TTTGTACGTA ATGGTAACAC AATTGTTATC
ATGCGCAGAC AACCGGATAT CGTTATCCGT GGTAAAGTAA CCGATGAAAG AGGTGAAATT
CTGATCGGTG TGAATGTTCG TCCGAAAAAT GGCGCCAGAG GTACCATTAC CAATAAAGAT
GGATTTTATA CCATCGCTGT TCCGTCTCCC GGCACATCCC TGGTATTCTC TTTTATGGGT
TATAGCATCC GTACTATACC GGTAAAAGAA ACCCAGACGC TGAACGTACA GCTGTTACCG
GATGCAAAAG CGCTGAAAGA AGTGGAGATT ACTACAGCAC TGGGTATTAA ACGTGATGAG
AAAGCCCTGG GTTATGCTAC TACTGTTGTA AAAAACGAAC AGCTGACCGA TGCGGTATCA
AATAACTGGA CCGATGCATT GTCCGGTAAA GTAGCGGGTC TGAATCTCGT GAGATCGAAT
GCGGGTCCTA CTGGTTCCAA CAAGATTATC CTGCGTGGCG AAAATAACCT GAATGGAGAT
AACGAAGCAC TCATTGTAGT AGATGGTGTG GTGATCAACC AGAGCAGTGG TCGTCGTACT
GCAAACAGTG GCGAATCGCC ATATGGTACT GCCAGTGACA ACCTGCCGGC TGACTATGGT
AGTGGTCTGA ACGACATCAA TCCTGAAGAT ATTGAGTCTG TTACCGTACT GAAAGGCCCT
GGTGCTGCTG CATTGTATGG TCAGCGTGGT GCGAATGGTG CATTGATCAT CACGACCAAA
TCAGGTAGTC CGAAGAGAAA AGGACTGGGT GTGACCGTTA ACTCAAATGC TGCTTTCGAA
CAGGTTAACC GTTGGCCTTC TCTCCAATAT GAGTATGGAC AGGGCCTGGA TGGCGCCGCT
TATTATTCTT ACGGTGCATC TGCTGACGGC GCCAGCACCA GTGGTACCAG CTCTGCTTAT
GGTCCACGTT TCGAAGGACA GAAATTCTTC CAGTATGATC CTGTGACACA GACACAGGGT
AAGGAGAGAA CGCCATGGGT GGCACATCCT GATCAGATAC AGAAATTCTT CCAGACTGGT
CAGACTTACA CTAACTCTGT GAGCCTGGAT GGTGGTACTG ATAAAACTAC TGCGCGTTTC
TCTTTTACCA ATGTGAAGAA TTCATGGGTC GTACCGAATA CAGGCTATGG CCGTAATACG
GTGGCGATGT CTGTGAATTC AAAAGTGAAC GATAAACTGC AGATATCTTC CAAGATCAAC
TACACGAATA AATTCAGCGA TAACCTGCCG GGAGCCGGGT ATGGCAACCA GTCACTGATG
TACTGGTTTA TCTTCTGGCA GCCCAATGCG GATCTTGACT GGCTGAAAAA CTACTGGACA
AATGGTCAGG AGGGAAAACA GATCAAATAT CCTTTCAGTT CCTTTCCGGA GAACCCATAT
GCGGTTTCTT ATGAGTTCCT GAACTCCACC AACCGTAATG GTATTACCGG TAATGTACAG
GCGACATATA ATATCGTAAA AGGATTGAGT GTACAGGTAA GAACCTCTAT TGACTTTGCC
AACGAACATC GTGAACAGAA ACGTCCTTAC GATGCTGGTG CCAAGTTCCA GCGTGGTAGC
TTCCGTACAC AGAATATCTT CGGTATGGAG TCCAGCACTG ACTTCCTGGT GAGATACAAT
GGTAAGATTG CCAAAGATCT TGAGCTGTCA GTAACGGCAG GGGGAAGCAC CCTGAGAAAC
AACTACAGAA AAGATGAGGT ACGTGCTGAC TCCCTGATCT ATCCCGGTAT CTATAGTATG
GCGAATGCTG CCGGTCCGCT GGTAACAATG CCATACACGT CCGGTTATAA ATTCAACAGT
GCATATGGTT TGCTGGCGTT GGCCTATAAA GAGTACCTGT TTGTGGACTT TACCGCCCGT
CAGGACTGGG CAAGCACATT GGCTACGCCT GCACGTACTG GTAACGCCGC GTTCTTTTAT
CCTTCTGCTA ACCTGAGTTT CGTTCCTTCT GAGTATTTCA AATTACCTGC TGCCGTAAAC
TATGCGAAAG TAAGGTTCTC TGCATCCGGT GTGGGTAGTG GTGGTACTAC ACCTTACCTG
ACCGCTTATA CTTATCCATC TGCGGGTAGT CTGTATAGTG GTGGTTTGGA AAATCCAGCC
GTACTAGCTA ATCCGAATCT GCGACCACTC AGGACTATTT CCTATGAAGT AGGTGCAGCA
GGTAAGTTCT TCAATAACCG TATCGGATTT GACCTGGCAT TATACAGAGG CATGTCCAAA
GACCAGCACC TGTACCGTAT CGTAGACCGT GCTTCGGGTT ACAACCAGGT TCTGGTAAAT
GCCGGTGAGG TAAGCAATAA GGGTATTGAG CTGGCGCTGA ATGGTACGCC CGTTTCCACC
AAGAATGGTT TCAGATGGAA TACCAATATC GTATTCTCTT CTAACCGCAA CAGGATTGAG
AAGCTGGTAG ACAGTTCTGT GGTATTGAAA ACCGGTTATG TTGGCGGTGG CCAGATTGTA
GCGCAGGTAG GCGGTAGCAT GGGAGATCTG TATGGGCGTG GTTATCAGCG TGCTCCTGAC
GGACAGGTGA TCTATGATAA AACAACCGGT GTAGCATTGC TCACTGAAGG TGTAAAATAC
TTGGGTAACA CGATCCCTAA ATTCAAATTG GGCTTCACCA ACGATTTTAT TTTCAAACAA
TTCCATCTGG GTATACAGTT CGATGGTCAA TATGGCGCGG TTGCACACTC CCTGACGCAT
TACAAACTGG CAGAGCAAGG TAAAACGACC AATACGCTGC CTGGCCGTTA CAATGGTATC
ATTGGTAATG GTGTCGTACA GGAAGGCGAT GGCAAGTTCC GCAAGAATGA CGTAATCGCT
ACAGATATCG ATGAATACTA TCGTTCTCAT TATGGGGTGG ATAACGCAGA GGGTAGCACT
TTCCGTACTG ACTTCATCAA ATTCAGAGAA GCGCGTCTTG ACTACACCCT CAATCCAAAG
GTGGCAAAAC GTATCGGTTT TCAGCGTGCA ACATTTGGCG TATACGGCCG TAACCTGTTC
ATCTGGTCTC CATGGCCAAT ATTCGATCCT GAATTCGGTA CCATCACCGG CACTGATATC
GTACAGGGCT TTGAAGTGGG CCAGTTCCCT TCTACCCGCT CATTTGGCTG TAACCTGGTA
CTCGTACTTT AA
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| Protein sequence | MDKSTNKRGG PLGNCCPQLK GIIRNAGLLV LLFFTAFMPA VYAQTGEQKL DISIEAQPLK
DVFQFIERNT SFVVNHSEDE INTAVRVSVN LKGATVTEIL RGALRATEYE FVRNGNTIVI
MRRQPDIVIR GKVTDERGEI LIGVNVRPKN GARGTITNKD GFYTIAVPSP GTSLVFSFMG
YSIRTIPVKE TQTLNVQLLP DAKALKEVEI TTALGIKRDE KALGYATTVV KNEQLTDAVS
NNWTDALSGK VAGLNLVRSN AGPTGSNKII LRGENNLNGD NEALIVVDGV VINQSSGRRT
ANSGESPYGT ASDNLPADYG SGLNDINPED IESVTVLKGP GAAALYGQRG ANGALIITTK
SGSPKRKGLG VTVNSNAAFE QVNRWPSLQY EYGQGLDGAA YYSYGASADG ASTSGTSSAY
GPRFEGQKFF QYDPVTQTQG KERTPWVAHP DQIQKFFQTG QTYTNSVSLD GGTDKTTARF
SFTNVKNSWV VPNTGYGRNT VAMSVNSKVN DKLQISSKIN YTNKFSDNLP GAGYGNQSLM
YWFIFWQPNA DLDWLKNYWT NGQEGKQIKY PFSSFPENPY AVSYEFLNST NRNGITGNVQ
ATYNIVKGLS VQVRTSIDFA NEHREQKRPY DAGAKFQRGS FRTQNIFGME SSTDFLVRYN
GKIAKDLELS VTAGGSTLRN NYRKDEVRAD SLIYPGIYSM ANAAGPLVTM PYTSGYKFNS
AYGLLALAYK EYLFVDFTAR QDWASTLATP ARTGNAAFFY PSANLSFVPS EYFKLPAAVN
YAKVRFSASG VGSGGTTPYL TAYTYPSAGS LYSGGLENPA VLANPNLRPL RTISYEVGAA
GKFFNNRIGF DLALYRGMSK DQHLYRIVDR ASGYNQVLVN AGEVSNKGIE LALNGTPVST
KNGFRWNTNI VFSSNRNRIE KLVDSSVVLK TGYVGGGQIV AQVGGSMGDL YGRGYQRAPD
GQVIYDKTTG VALLTEGVKY LGNTIPKFKL GFTNDFIFKQ FHLGIQFDGQ YGAVAHSLTH
YKLAEQGKTT NTLPGRYNGI IGNGVVQEGD GKFRKNDVIA TDIDEYYRSH YGVDNAEGST
FRTDFIKFRE ARLDYTLNPK VAKRIGFQRA TFGVYGRNLF IWSPWPIFDP EFGTITGTDI
VQGFEVGQFP STRSFGCNLV LVL
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