| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5171 |
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| Symbol | |
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| ID | 8361348 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 6451345 |
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| End bp | 6451908 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644967319 |
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| Product | PhnA protein |
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| Protein accession | YP_003124803 |
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| Protein GI | 256424150 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2824] Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism |
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| TIGRFAM ID | [TIGR00686] alkylphosphonate utilization operon protein PhnA |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.310533 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.00969198 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAGCACAA CTATTACGCC TGCCTTAAAA GACCGTAGCA ACGGTACCTG CGAACTTTGC
ACCACTGAAG CGGCGACTAT CGCCTTCGCT GTAAGCCCTA AAAATAACGA CGTCATTGAA
AATGAAGTGG CTATCTGTCA GACCTGCGCT GACGCCATGA AAAATCCGGA CGCCGTTATG
CACTGGCACT GTCTCGCAGG AAGTATCTGG AACACAGAAC CCAGCGTACA GGCTTTAAGT
TACAGACTGC TTTACAAACA CAAAGACCAG GAATGGGCAT CTGAGATCAT TGATACCGTT
GAACTGGATG AAGCCGTTAG TAACTGGGCG TTAAGCGCAT TTCAGGTAAA GGAATTACAC
CGTGACAGCA ATGGCACAGA ACTGCTGCAT GGCGATACCG TTGTACTGAC ACAAGGACTA
AACGTAAAAG GAGCCAATTT CATGGCGCCT AAAGGAACAA TCGTGAGAAG GATTAAACTC
GTGCCGGATA ACGTAGAGCA GATAGAAGGA AAGATCAATG ACCAGACCAT TGTGATCCTG
ACGAAATATG TGCGCAAATC GTAG
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| Protein sequence | MSTTITPALK DRSNGTCELC TTEAATIAFA VSPKNNDVIE NEVAICQTCA DAMKNPDAVM
HWHCLAGSIW NTEPSVQALS YRLLYKHKDQ EWASEIIDTV ELDEAVSNWA LSAFQVKELH
RDSNGTELLH GDTVVLTQGL NVKGANFMAP KGTIVRRIKL VPDNVEQIEG KINDQTIVIL
TKYVRKS
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