Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4839 |
Symbol | |
ID | 8361015 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 6045553 |
End bp | 6046695 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644966989 |
Product | FAD dependent oxidoreductase TIGR03364 |
Protein accession | YP_003124474 |
Protein GI | 256423821 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | [TIGR03364] FAD dependent oxidoreductase TIGR03364 |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0215652 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.000104965 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACACAGC AAAAAGCTAT CGTTATAGGC GCAGGCATCG TAGGTATTGC AACTGCCAGA GCACTCGCGC TAAAAGGTTT TGAAGTCGAG GTATTCGAAA GGGACGAACG TGCAGTGGGC GCTTCCATCC GGAATTTCGG GATGATATGG CCCATCGGTC AGCCATCAGG AAGACTGTAT AATAGAGCCA GGCGCTCCCG CGAAATATGG CAATCCATCT GTGAAGAAGC CGGCATCTGG CACGACCCGG TCGGATCTTT ACACCTGGCT TACCATGACG ACGAACTACA GGCGATCCGC GAATATGTAG CCGCTAATGC TGCCGAACGT GGCTGTACAC TCCTGACGCC GGCTGAAGCA TTAGAGAAGT CTGCATCCAT CAACCCCGAA GGATTACTCG GCGCACTCTG GAGCCCGGAC GAAATGATCG TTGAAGCAAG GGAAGCAATC GGACAAGTAG CCGCCTTCCT GGAAAAGAAA TATCATATCC GTTTTCACTG GCATACCGCC ATCCATAAAA TCAGCTATCC CGCCGTCTAT TCGGGCGACC GGCAATGGGA AGCCGACAGG ATCTATGTAT GCAGTGGCGT AGACTTTGAA ACGCTGTATC CTGACACCTT CCGTCAACTG AGTCTGACCA AATGCAAATT ACAGATGATG CGTGCTGCTG CCCTACCTGA AAAACAGCGT ATAGGCCCAT CGCTTTGCGG CGGATTATCC ATGGTGCATT ATCCTGGTTT TCAGTCTGCC GCCTCACTGC CTGCTCTGAA AAACCGTTAC CAGCAACAAT ACGCAGAAGA ATTGAAATGG GGTATTCACG TGATGGTATC GCAGAACCAA TACGGAGAAC TTACCATCGG CGATTCTCAT GAATATGGTC TCACCCATGA TCCATTCAGC CGGGGTTTTA TCGACCAGAT GATCATCCGC TACCTCGGTA CATTCACACA ATTACAATCA TCACAGATCA TCCAGCACTG GGTCGGCTTC TATCCAAAGA TGACAAACGG CAACACAGAA CTGATACTCA GTCCGGAAAA AGGTGTCACC ATCATCAACG GCGTCGGCGG TAACGGTATG ACGCTGTCCT TCGGACTCGC AGAAGAAGTG ATCAACGGAG AGATCTCTGT CAGCACTCTG TAA
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Protein sequence | MTQQKAIVIG AGIVGIATAR ALALKGFEVE VFERDERAVG ASIRNFGMIW PIGQPSGRLY NRARRSREIW QSICEEAGIW HDPVGSLHLA YHDDELQAIR EYVAANAAER GCTLLTPAEA LEKSASINPE GLLGALWSPD EMIVEAREAI GQVAAFLEKK YHIRFHWHTA IHKISYPAVY SGDRQWEADR IYVCSGVDFE TLYPDTFRQL SLTKCKLQMM RAAALPEKQR IGPSLCGGLS MVHYPGFQSA ASLPALKNRY QQQYAEELKW GIHVMVSQNQ YGELTIGDSH EYGLTHDPFS RGFIDQMIIR YLGTFTQLQS SQIIQHWVGF YPKMTNGNTE LILSPEKGVT IINGVGGNGM TLSFGLAEEV INGEISVSTL
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