| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4823 |
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| Symbol | |
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| ID | 8360999 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6024714 |
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| End bp | 6026201 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644966973 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003124458 |
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| Protein GI | 256423805 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000639961 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00000000207149 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAACGAA TGCGCTTCCT GCTGCCGTTG CTGACGGTCT TAACGTCCTG CGTCAATTTT
CTGGATGAAC AGCCATCTGG TTCGCTGGGG CTGGACGACT ACTATAAAAC GGCAGAACAG
ATCAAAGCGG CTGTCAATGG AACCTATGAG GGCCTGTCGC TTCCCTATGC TGAGAATATT
GGCGTAGCTG TTAGTCCGGT GTATTCTCTG GAGTATGTCA CCGGCTACAG CCGACGCCCA
AGACCTTCGG GTTTTGAAGA TGATCAGTTC CTGCGGTTAG ACAGACTGGA TGCAGCTAAT
TCCAGGTTGC AGGCATGGTG GAATGCGACT TATTATCCGG TTGAGAATTG TAATAGTGTG
ATAGAAAATG TGAGTGTCAG TACGTTGATA GATGAGACGA CCAAACAACG GTATCTGGGA
CAGGCGTATT TTATGCGTGC CTGGTATTAC TTCCAGGGAG TACAGCTCTT CGGAGATATA
CCTTTGAAAC TGACTACTAC GAAAGATCCG AATGATGTGA AGATCCGCCG TTCACCAAAG
GAAGCGGTGT ATGATCAGAT TGTAAAAGAC CTGCTGAAAG CTGAGGGTAG CGGTCTGCCC
TGGATAGATC GGAGCGGGCA TGTTAGTCTG GGAACGGTGA AGTCATTACT GGCGAAAGTA
TACCTGACAA TGGCTGGTTA CCCGATGCAA CGAGGGATCA CGTATTACGG AAAGGCATAT
GAGAAGGCGC TGGAGGTGAT TAACAGCAGA CAGTTTAATC TGTTTGAGAC TTATGAAGAT
CTCCGTGATC CGGCGAAGAT GAATACGGGA GAAAACATCT TTATGTTACA ACGTCATCCG
ACGATGGCGG AGAGTAATAT TCATGGTGCG TATCTGCCAT ATCCTACTGA GCCGATTTCC
ATACAGCCGG CTTATGGAGG AGCGATGGCG CCGACATTGG CTTTCTATAA CTCTTACGCG
GCGAATGATG GCCGTAAACA GGAACAGGCG TTTTATTATA CCCGCTATCC GCGATATGAT
AATCCTACAG AGATTATCAC GTTTTCAGAT CCTTATATTT TTAAGTTCTG GGATGCGGAT
GCAGAAAAAA CAGGCCGTTC GGGCGCTAAC TTTCCGCTGA TACGTTATGC AGATGTGCTG
TTGTTATGTG CAGAAGCAAA GAGTCAGCTG GATGGCGGAA GTACCACAGA TGCGGCAGCG
ATTGCGGCTT ATTATGCGGT ACGTCAGCGT GCGTTTCCGG CAGCAGGGCA ACCAACAATA
TTAACAACAG ACGATATTCT GAAAGAGAGA TACTGGGAAC TTTGTTTTGA ATTTCAGACA
TGGTATGATA TGTTGCGCAC ACGTAAAGCG TTTGATGTGG CCAACGGTAC GATGACCAAC
CTGTTAGGAT ACAAAGCACC GAATCACCTA CGGGCCTTTG AACTGAAAGA CCTTACGTTT
CCGCTGCCAT TAGCGGAAGT TCAGAAAAAC CCGGATTTAG CACTTTAA
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| Protein sequence | MKRMRFLLPL LTVLTSCVNF LDEQPSGSLG LDDYYKTAEQ IKAAVNGTYE GLSLPYAENI
GVAVSPVYSL EYVTGYSRRP RPSGFEDDQF LRLDRLDAAN SRLQAWWNAT YYPVENCNSV
IENVSVSTLI DETTKQRYLG QAYFMRAWYY FQGVQLFGDI PLKLTTTKDP NDVKIRRSPK
EAVYDQIVKD LLKAEGSGLP WIDRSGHVSL GTVKSLLAKV YLTMAGYPMQ RGITYYGKAY
EKALEVINSR QFNLFETYED LRDPAKMNTG ENIFMLQRHP TMAESNIHGA YLPYPTEPIS
IQPAYGGAMA PTLAFYNSYA ANDGRKQEQA FYYTRYPRYD NPTEIITFSD PYIFKFWDAD
AEKTGRSGAN FPLIRYADVL LLCAEAKSQL DGGSTTDAAA IAAYYAVRQR AFPAAGQPTI
LTTDDILKER YWELCFEFQT WYDMLRTRKA FDVANGTMTN LLGYKAPNHL RAFELKDLTF
PLPLAEVQKN PDLAL
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