| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4709 |
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| Symbol | |
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| ID | 8360885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 5866910 |
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| End bp | 5870554 |
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| Gene Length | 3645 bp |
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| Protein Length | 1214 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644966862 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_003124347 |
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| Protein GI | 256423694 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.204837 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0609725 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCTTTT CCCACTTACA CGTTCATACA CAATATTCTC TGCTGGATGG TGCGGCAGAC
ATCAAATCAT TGTACAAGAA AGCCATGGCC AGCAATCAGC CGGCGCTGGC CATCACGGAC
CATGGTAATA TGTTCGGCGC TTTCCAGTTT GTGGCAGAAG CTTATAACAA CAGACTGAAT
CCCGAAGATC CGAAGGATAA AAGGCTGAAG GTAAAACCTA TTGTCGGCTG CGAGTTCTAT
GTAGTAGAAA ACCGCTTCAA ACGCGCTTTT ACCCGTGAAG AGAAAGATAT CCGTAATCAC
CAGGTCTTAC TGGCGAAAAA CGATGAAGGT TACCGTAACC TTATTAAGCT GTGTTCCCTT
GGTTATATCG AGGGACTGTA CGGTAAATAC CCCCGTATTG ACAAAGAACT CATTCTTCAG
TATCATAAAG GACTGATCGC CACGACCTGT TGTCTGGGCG CCTCCGTACC CAGGGCGATT
CTCAAAAAAG GAGAAGAAGC CGGCGAAGAA GAATTCAAAT GGTGGCTGGA CATCTTCGGG
GAGGACTATT ATGTTGAATT ACAGCGACAT GGCATTCCCG AACAGGAGAA AGTGAATGAG
TCCCTGATCA AATTTGCGAG CAAACACAAC GTAAAGATCA TCGCCTCTAA TGACTCCCAC
TATGTAGACC AGGCAGATGC GAACGCACAC GACATTCTCC TTTGTATCAA CACCGGTGAG
AAGAAGAGCA CTCCTACCAT GAAGGATTTC TCTGATGACG ACGTGTCCAT GAAGAACAAG
CGTTTCGCTT TCTATAACGA CCAGTTCTAC TTTAAGACGA CGGAAGAAAT GACGGCGCTC
TTCCAAGATC TGCCACAGGC TATTGATAAC ACCAATGAGA TCGTGGACAA GGTGGAACTG
CTGGATCTGA AGCGGGACAT CCTCCTGCCC AACTTCCCTA TTCCACCGCC ATTCCTGACA
CAGGACCAGT ACCTGCGTCA TATTACCATG GAGGGTGCGC ATAAGAAATA CGCAGAAGTG
ACGGCTGAGG TGGAAGAACG TATCAATTTT GAGCTGAGTG TAATTGAGAA CATGGGATTT
GCGGGCTACT TCCTGATCGT ATCTGACTTT ATCAAGGCAG GCCGCGATCT GGGCGTATTC
ATCGGTCCGG GCCGTGGTTC GGCGGCAGGT TCGGCGGTAG CTTACTGTAT TGGTATCACC
AATATTGACC CGATCAAGTA TAACCTGCTG TTTGAGCGTT TCCTGAATCC GGAACGTAAG
AGCATGCCCG ATATTGATAC GGACTTCGAT GATGAAGGCC GTCAGAAGGT AATTGACTAT
GTTGTAAATA AATATGGTAA AAACCAGGTA GCACAGATCA TTACTTACGG TACCATGGCC
GCCAAGATGA GTATCAAGGA CGTGGCCCGT GTAATGGACC TGCCACTGGT TGAATCCAAC
ATGCTGGCCA AAATGGTACC TGATAAACCA GGGATTCAGC TGGACCGCAT TTTCAACGCC
CCTATTGATG AAGGCGAAAA GAGCCTTGCG GAGAAAGAAG GGCTGGGTCC TGAAGACCTT
GAAAATGTGA AGCGACTCCG TGAACTGATC AAAGGACAGG ATCTACAGGG TGAAGTATTG
CGGGAAGCCT GCGTACTGGA AGGATCCGTA CGTAACACCG GTATCCACGC GGCAGGTATC
ATCATTGCGC CGAAAGACCT GTACGACCTG ATCCCTGTAT CTACCGCCAA GGACTCTGAC
CTGCTGGTCA CACAGTTTGA AGGTAGTATC ATCGAGAGCG CCGGTGTAAT CAAAATGGAC
TTCCTGGGTC TGAAGACCCT CACCATTATC AAGGGCGCCC TTGAACTGAT CAGAACCAAC
CACGGTATAG ATATCAGCAT CGACGATATT CCACTCGATG ATGCCAAAAC ATATGAGCTT
TATCAGAAGG GAGAAACGAA CGCCACGTTC CAGTTCGAGT CCGCCGGTAT GCAGAAATAC
CTGCGCGAAC TGAAACCTGA CCGATTCGAC GACCTTATTG CGATGAACGC CTTGTACCGT
CCGGGACCAT TGGAGTACAT TCCTTTGTTC ATCCGTCGTA AACACGGATT GGAAGAGACG
GTGTATGACC TGGCGGAAAT GGAAGAATAC CTGAATGATA CCTATGGTAT TACGGTATAC
CAGGAGCAGG TAATGCTACT GAGCCAGAAA CTGGCCAACT TCTCCAAAGG TGATGCGGAC
GTACTCCGTA AAGCGATGGG TAAGAAACAG AAAGCGGTAC TGGATAAAAT GAAGAAACAG
TTCATGGAAG GTTGCGCCGC TAACGGCCAT GACCTGAAAG TCTGTGATAA AGTATGGACG
GACTGGGAGG CATTCGCATC CTACGCGTTC AACAAATCCC ACTCTACCTG TTACGCCTTT
GTAGCTTATC AGACCGCTTA CCTGAAAGCG CACTATCCGG CGGAGTACAT GGCGGCAGTA
CTGAACAACG CCAGTAACAT TGAAAAGATC ACCTTCTTCA TGGAAGAAGC GAAACGCATG
GGTATCGACG TATTGCCACC TGATGTGAAC GAGTCATTCA AAGGCTTTGC GGTGAACAAA
CAAGGTCAGA TCCGTTTTGG TCTGGCCGGT CTGAAAGGTG TGGGTGAAGC AGCGGTAGAA
AACATCCTGG AAGAAAGACA AAAGGGAAGT AACTACAAGA ACATCTTTGA AATGATTAAA
CGTGTGAACC AGCGTGCAGT GAATAAGAAA TCACTGGAAG CCCTGGCCAT GTCAGGCGCT
TTCGATTGTT TCCCTGAGTT ACACCGTGCA CAATATTTCC ATAAACCGGA TAATGACAAT
ACCACCGGTC TTGATAAGAT CGTGAAGTTC GGTCAGCAGG TATCGGCTGG AGCTGCCACT
ACCATGAGCA GCCTGTTCGG TGCAGATGAT ATGCCGGAGG TAGAACCACC AAAGATCCCA
CCTTGCGATC CATGGCCACT GATCCTGAAG CTTAACAACG AGCGTGAGGT GACGGGTATT
TATATTTCTG GTCACCCGCT GGACGACTAC CGTTTCGAAT CACGTTATTA TAACATGAAC
ACGGTACAGG AATTGGTTGA ATATCAGGCA GATCTCCAGG CGCCTGGGAA TGCTAAATCC
GGCCGTGAAC GTAACTTCAG ACTGGCTGTC TATGTGACCG GTGCACAGGA GCGTATTTCG
CGAAACAACC GCCAGTTTGG CATAATGACG ATAGAAGACT ATTCCGGTAA GTTTGAGTTC
GCTTTATGGA GTGAGGACTT CATCCGCTTT GCGCCATATC TGAAAACAGG GCTTTGTCTG
TTTATTAATG GTGGTTTCAA GGCCAAGCGT TTTAATGATG CAGAATATGA GTTCAAGGTG
AACGGTATAC AGCTGTTACA GGAAGTGAAG AAGACGCATA CGAAGAAGGT AACACTGGTA
ACCATGCCTA AGTTCATCAC ACGTGAGCTC GTAGACTTCC TTGTTGACAA CATTAACAAA
TACCCGGGAG CGAGTGAGCT GTTTTTACAA CTCATTGATC GTGATGATGC CATGCAGGTG
AAATTGCATA CATTTAATAA ACATATCGAG ATGAACGATG AATTGGCACA CTTCCTGTCG
AAGCAACCAG ACATCGATAC CTATATAGAT ACAATCAATA AGTAG
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| Protein sequence | MIFSHLHVHT QYSLLDGAAD IKSLYKKAMA SNQPALAITD HGNMFGAFQF VAEAYNNRLN
PEDPKDKRLK VKPIVGCEFY VVENRFKRAF TREEKDIRNH QVLLAKNDEG YRNLIKLCSL
GYIEGLYGKY PRIDKELILQ YHKGLIATTC CLGASVPRAI LKKGEEAGEE EFKWWLDIFG
EDYYVELQRH GIPEQEKVNE SLIKFASKHN VKIIASNDSH YVDQADANAH DILLCINTGE
KKSTPTMKDF SDDDVSMKNK RFAFYNDQFY FKTTEEMTAL FQDLPQAIDN TNEIVDKVEL
LDLKRDILLP NFPIPPPFLT QDQYLRHITM EGAHKKYAEV TAEVEERINF ELSVIENMGF
AGYFLIVSDF IKAGRDLGVF IGPGRGSAAG SAVAYCIGIT NIDPIKYNLL FERFLNPERK
SMPDIDTDFD DEGRQKVIDY VVNKYGKNQV AQIITYGTMA AKMSIKDVAR VMDLPLVESN
MLAKMVPDKP GIQLDRIFNA PIDEGEKSLA EKEGLGPEDL ENVKRLRELI KGQDLQGEVL
REACVLEGSV RNTGIHAAGI IIAPKDLYDL IPVSTAKDSD LLVTQFEGSI IESAGVIKMD
FLGLKTLTII KGALELIRTN HGIDISIDDI PLDDAKTYEL YQKGETNATF QFESAGMQKY
LRELKPDRFD DLIAMNALYR PGPLEYIPLF IRRKHGLEET VYDLAEMEEY LNDTYGITVY
QEQVMLLSQK LANFSKGDAD VLRKAMGKKQ KAVLDKMKKQ FMEGCAANGH DLKVCDKVWT
DWEAFASYAF NKSHSTCYAF VAYQTAYLKA HYPAEYMAAV LNNASNIEKI TFFMEEAKRM
GIDVLPPDVN ESFKGFAVNK QGQIRFGLAG LKGVGEAAVE NILEERQKGS NYKNIFEMIK
RVNQRAVNKK SLEALAMSGA FDCFPELHRA QYFHKPDNDN TTGLDKIVKF GQQVSAGAAT
TMSSLFGADD MPEVEPPKIP PCDPWPLILK LNNEREVTGI YISGHPLDDY RFESRYYNMN
TVQELVEYQA DLQAPGNAKS GRERNFRLAV YVTGAQERIS RNNRQFGIMT IEDYSGKFEF
ALWSEDFIRF APYLKTGLCL FINGGFKAKR FNDAEYEFKV NGIQLLQEVK KTHTKKVTLV
TMPKFITREL VDFLVDNINK YPGASELFLQ LIDRDDAMQV KLHTFNKHIE MNDELAHFLS
KQPDIDTYID TINK
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