Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4584 |
Symbol | |
ID | 8360757 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 5728328 |
End bp | 5729947 |
Gene Length | 1620 bp |
Protein Length | 539 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644966739 |
Product | Glycerone kinase |
Protein accession | YP_003124227 |
Protein GI | 256423574 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2376] Dihydroxyacetone kinase |
TIGRFAM ID | [TIGR02361] dihydroxyacetone kinase, ATP-dependent |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.150824 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTTCT TTATAAACGA AGTTGACCAG ATCGTAAATG AATCAATTGA TGGCCTGTTA ACCAATCCCA GGTTGGCCAA ACTGGATAGT TTCCCTCAGG TACGCGTGGT CGTGCGAAAA GATTGGGATA AGTCTAAAGT AGCCGTTATT TCAGGTGGAG GCTCCGGGCA TGAACCTGCC CATGCGGGTT TTGTGGGTAA GGGAATGCTG ACTGCGGCTA TCTGTGGCGA TATATTCGCT TCTCCTTCTG TGGATGCGGT ATTGTCGGCT ATTCTGGCAG TCACCGGACC AGCGGGATGT TTGCTTGTCA TTAAGAATTA TACCGGCGAC AGACTGAATT TCGGTCTGGC CGCTGAACAG GCCCGCGCCT TAGGTTATAA CGTTGAAACG CTGATCGTGG GAGACGATAT TGCGCTTGGT AAGGAAGTAC ACAGAAGAGG ACTTGCGGGA ACACTGTTTG TCCATAAAAT AGCCGGACAA CTGGCAGAAG AAGGTGGTTC GCTTGCAGAA GTAAGCCGTG TTGCTCATAC TGTTGCAGGA CAGATTGCTT CGATCGGTCT ATCCTTATCA GAATACCGGC AATTGGGACA GGCATTCCAC TCCCGTTTGC GGGATGACCA GGTAGAGCTG GGCTTAGGCA TACATGGTGA ACCAGGCATC GATATCATTC CTTATGATAA GGCAGATAAG CTGATGGAGA TCGTTGTAAA AAAGTTACTG GAAAGTTTAG CAGTTCCCGA TAGCCGCTAT GCACTGCTCT TTAATAATAT GGGCGGTGTC AGTCCGGTGG AAATGGGCCT CCTGGTCAAT TCTTTCCGGA AGAGCACTTT TGCCGCACAG GTGGATTATC TCATTGGTCC CTCTCCGATG ATGTCTTCCA TCAATATGAA CGGTTTCTCC ATATCCGTCT TGCAGTTATC TGATGAACTT GAGCGTTTAC TGCTATCTTA TGCGGAGCCT TCCGCCTGGC AGCTGCACCG CTTTAAAACG CCAATAACGG TAGAAAGTCC GGTATTGCCG CCTACCATTC AATATCCTGC TTCCGCCAAT GCAACGGTGA GAGCGCTGAT ACAAGGTATT GCCAGTCTGC TGGTGAGCAT CGAAACAGAG ATCAATATGC TGGATGCGAA AGTAGGAGAC GGAGACGCCG GTTCTACTTT TGCGCTGGCG GGTAAACTGA TACTCTCCCA TCTTGACCAG CTACCCTTGA ATGAGACGGA TAAACTCCTG ACGACTATTG GTCGCCTGAT GGCAAGACAA GCCGGTGGAT CCAGCGGCGT ACTATTGTCT ATTCTCTTCA CGGCTGCAGG CAGTGCTTAT GCAGAAGAGG CAGATCTTGG GAAAGCCTTA TCCGCAGGAC TACAAAGCGT CAAACATTTC GGGGGTGCAA AAGTTGGCGA CAGAACCATG ATAGATGCCC TGGAACCTGC TTTTGCCGCT TTAGATACCT CGCTGGCACA AGCTGCCTTA CAAGCACGTG AAGGGGCAGA AAGCACCAGA AGAATACTCA ATACAAAATT CGGCCGTTCT TCTTACCTGG CTGAAAATAC GCTGAGAGAT ATTCCCGATC CGGGAGCAGA GGTGATTGCC AGGGTTTTTG AGTATGTTGC TGCACAGTAA
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Protein sequence | MKFFINEVDQ IVNESIDGLL TNPRLAKLDS FPQVRVVVRK DWDKSKVAVI SGGGSGHEPA HAGFVGKGML TAAICGDIFA SPSVDAVLSA ILAVTGPAGC LLVIKNYTGD RLNFGLAAEQ ARALGYNVET LIVGDDIALG KEVHRRGLAG TLFVHKIAGQ LAEEGGSLAE VSRVAHTVAG QIASIGLSLS EYRQLGQAFH SRLRDDQVEL GLGIHGEPGI DIIPYDKADK LMEIVVKKLL ESLAVPDSRY ALLFNNMGGV SPVEMGLLVN SFRKSTFAAQ VDYLIGPSPM MSSINMNGFS ISVLQLSDEL ERLLLSYAEP SAWQLHRFKT PITVESPVLP PTIQYPASAN ATVRALIQGI ASLLVSIETE INMLDAKVGD GDAGSTFALA GKLILSHLDQ LPLNETDKLL TTIGRLMARQ AGGSSGVLLS ILFTAAGSAY AEEADLGKAL SAGLQSVKHF GGAKVGDRTM IDALEPAFAA LDTSLAQAAL QAREGAESTR RILNTKFGRS SYLAENTLRD IPDPGAEVIA RVFEYVAAQ
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