| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4549 |
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| Symbol | |
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| ID | 8360722 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 5684024 |
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| End bp | 5685454 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644966704 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003124192 |
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| Protein GI | 256423539 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0213349 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0641014 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTACAGC TTTCAATACA TAAGAAAATT ATTGCCGGTC TGTTACTGAC CGGATGTACA
TTCAGCGCCT GCCGTAAACT GGTGGAGATT GGTCCGCCGG TAAACCAGGT AGGTCTTGAC
CAGAGCTTTG AATCTGATGC AACCGCGACC AGTGCCGTAC TCGGTATCTA CAATGCGAGC
AATACACGCT CCTTTATTTT ACCAGCCACC GTATTGCCAG GATTATCTGC CAATGAGGTC
CAGAATAACG TGTCTTCCCC TGCTTATGAC GAGTTTAAGC AAAATGCCAT CACGATCACC
AACAGCAATA TTGCCAATCT GCTCTGGTAT TACCCTTACT ATACCGTCTC ACAGACCAAT
GCGATGATGG AGGGTATAGA AAGAAGTGGT TCACTCTCAC CCGCTGTGAA GAACCAGCTG
CTGGGAGAAG CGAAAACCTG GAGAGCTTTT GTTCTCTTTC ACCTGGTAAA CTATTACGGA
GCCGTTCCGC TGCCACTGAC TGACGATCCT ATTGGTAACG CCACGCTGGC AAGGACGCCT
GCCACACAGG TATGGCAACG TATCATTACG GACCTTAAAG ACGCGGTTGC CCTATTAAGT
GATACCTATC CAAGTGTACT GAGAGCACGC ATAAACCGTC AGACGGCCAA CGCTTTACTG
GCAAGGGCTT ATCTCTATAC AAAAGACTGG CAGAATGCTG AAGTGACTGC CAGTGCGGTG
ATAGGTTCCG GTATCTACAG CCTGAGTCCT GATGTGAATG CAGCGTTTGT CAATACAAGT
AATGAAATTA TCTGGCAGCT GGCCACCCTG ACCGGCGTTT CAATCTATAC GAGCAATACG
GATGCTGCCG GCGGAAGTTT TGCAGCTGCC AGTGGTACCG TACCAGCATT CAGTCTGACA
GACACCCTGT ACAACAGTCT GGAAGAAGGC GACCTGCGTA AAACCAGCTG GGTAACTCCT
ACCGTCATCG GAGGTACTAA CTACAAAGTG ATGACCAAGT ATAAGCTCCG CGTATTGCCA
TCCGGCACTA CTACCGGTAA TGAGTTCAAC GTTGTACTCC GTCTTGCCGA GCAATACCTG
ATCAGGGCAG AAGCGCGTGC ACAGCTCAGT AACCTGGGTG GCGCTATTGC AGATGCTGAT
ACGATCCGCA GAAGAGCAGG TTTGCCGATG CTGGACGATA ACCTCTCCCA GCAGCAGGTA
CTGCTGGCCA TCGAAAAGGA AAGAAAAGCA GAACTCTTCG GAGAATGGGG ACACAGATGG
TTTGACCTGA AACGTACACC GAGTGTTGTC AGTCCGGCGG ATAAAACCCG TGCAGACGAT
GTCATCGGAG GTATGCGTCC TGCCACCTGG AACGTGACAG ACATCCTGTA CCCGATACCG
GATGCACAGC GCACGGCCAA TCCTGCATTA ACACAAAACC TGGGATACTA A
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| Protein sequence | MLQLSIHKKI IAGLLLTGCT FSACRKLVEI GPPVNQVGLD QSFESDATAT SAVLGIYNAS
NTRSFILPAT VLPGLSANEV QNNVSSPAYD EFKQNAITIT NSNIANLLWY YPYYTVSQTN
AMMEGIERSG SLSPAVKNQL LGEAKTWRAF VLFHLVNYYG AVPLPLTDDP IGNATLARTP
ATQVWQRIIT DLKDAVALLS DTYPSVLRAR INRQTANALL ARAYLYTKDW QNAEVTASAV
IGSGIYSLSP DVNAAFVNTS NEIIWQLATL TGVSIYTSNT DAAGGSFAAA SGTVPAFSLT
DTLYNSLEEG DLRKTSWVTP TVIGGTNYKV MTKYKLRVLP SGTTTGNEFN VVLRLAEQYL
IRAEARAQLS NLGGAIADAD TIRRRAGLPM LDDNLSQQQV LLAIEKERKA ELFGEWGHRW
FDLKRTPSVV SPADKTRADD VIGGMRPATW NVTDILYPIP DAQRTANPAL TQNLGY
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