Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4495 |
Symbol | |
ID | 8360668 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 5592879 |
End bp | 5595419 |
Gene Length | 2541 bp |
Protein Length | 846 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644966650 |
Product | hypothetical protein |
Protein accession | YP_003124138 |
Protein GI | 256423485 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.0732922 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAAGAT TGAAACTAAG CCCAGGCGTA TGGCTTTTGT CATGCGTCCT GCTGGCCGCA TCTGTACAGG CTACAGCACA GCGGAAAAAG AAGAAAGATA AAGAAACCAC GCCTGCTGAG ATAAAGGCGG ACACCACTGT TGGTAAAAAG CCCGCACCCT CGAAGCTAAA GAAGTATAGT GACGTGATCA CCAAAGACAT GCGCACGGAT ACCGGTTTCA TTATTGTTCA CGCCAAAGAA GACGAGTATT ATTTTGAAGT GCCATTGTCT GTCATGGGCA AGGACATCCT GATCGTTAAC CGTGTAGCAG AAGCTTCTGT AGACATGCGT AACGGTAACT GGGGCCTTAC CGGCGACCAG ATAGGAGAGG CGGTATACCG CTTTGAAAAG GCGCGTAATA ACAACCTCTA TCTCCGCAGA CTCTCTTTCT CCGAATACAG CGGCGATACT TCTAAACCCA TGTACACCAG TGTGCAGCGT AACAACGTAC AGGCAATTGC AGCTGTATTC CCGATTGTTG CCTATAACGC TGATTCCAGT GCAGTCGTAC TGAACATGAG CGAATTCCTG AGCAGTGATA ACGACATCAC TTACTTCAGT AAGCCGTTGT TTAAAACGCG TGCAGGTATG GGCGCTCAGC AGAACGACAG GAGTTATGTG AAATATGTAC ACGCTTATCC CACCAACGTA GAGGTACGTG CATTCAAAAC ATATGCAGCT GGTCTTAACC CAACATCTGC TAACTATAGC GTGGAATTGA ACTCTTCTAT GGTGCTGCTG CCTGAGAAGA TGGCCCGTCC GCGTTTACAG GACAAACGCG TGGGTTATTT CACCATCTCA CATAAAGACT TTGACGCTAA TCCGCAGGGT GTAACCAATA CCACCTATGC TGTACGCTGG AGACTGGAGC CTAAACCGGA AGACGTAGAA AAATACAAAC GTGGTGAGCT GGTAGAACCG GTAAAGCCGA TCGTATTTTA TATCGATCCA TCTACCCCAA AGAAATGGAT CCCTTACCTG ATACAGGGTG TAAATGACTG GCAGGCTGCT TTTGAGCGCG CTGGTTTTAA AAATGCCATT TATGCACGAG AAGCGCCTTC CCGTCAGGAA GACAGCACCT GGAGCCTGGA AGATGCGCGT CACTCCGCCA TCATCTACCG TCCTTCATCC ATAGCCAATG CCATGGGCCC CAATGTAAAC GACCCGCGTA CCGGCGAGAT CCTGGAGAGT CACATCTTCT GGTACCACAA TGTGATGTCA CTGCTGCAGA AATGGTATTT CGTACAGTGT GCGGCTGTTG ATACCGGTGC GAGAAAGCTG GTATTTGACG ATAAACTGAT GGGGGATCTG ATCCGTTTTG TGTCTTCTCA TGAGGTAGGT CACACACTCG GTCTGATGCA CAACTTCGGT TCCAGTTCCA CCGTTCCGGT AGAAAACCTG CGTAACAAGG CATGGGTAGA GAAATATGGC CATACACCTT CCATTATGGA CTACGCACGT TTCAACTATG TAGCGCAACC GGAAGATAAT ATCAGCCGTG CAGGCTTGTA TCCCCGCATC AATGACTATG ATAAATGGGC AATTGAATGG GGGTACAAAT GGCGCGATAA CGTGAAAGAT GAATATGAAG AGCAGAAATT ACTGACGCCG ATTGTTACTG ATAGTCTGAA GAACCAACGT CTCTGGTTTG GCAGTGAAAT GGAGCCACTG GATCCACGCT GTCAGAACGA AGACCTGGGG GATGATGCGA TGAAAGCGGG TACCTATGGT ATCATGAACC TGAAGCGTAT TATCAAAAAC CTCGGTCAGT GGACTTACGA GCCGGAGAAG GATTATACCA ATATGCGTAA CATGCTGACA GCAGTGTACG ACCAGTATGG TACCTACATC GGACACGTGG TACGTAATAT CGGCGGAGAA TACCACACCG AAAAAATTGC GGGGCAGCCG GGTGCTACTT ACGAAGTGGT AGAATACAAA CGTCAGAAAG AAGCAGTGGC TTTCCTGGAT AAGGAACTGT TCACAACGCC TGAGTGGCTG AACGAGAAAT CGCTGATGGA TAAGATACCT GATAAATTCG GCATTGACCT GAGCGAGGTG CAGAGAGGGG TGTTAAATGG TATTTTAAAC CGTTTCCGTA TGACCTCTAT GCTGGCAGCA CAGCATGATG GTAAAGGTAC CGGCAAGGTG TATACAGCTG ACGAGCTGAT GCTGGACCTG GACAAGATCG TCTTCAGAGA ATTGTATGAA GGCAAAAGTG TAAGTTTCTA CAGACGCAAC TTACAGAAGA TCTATATCAA CAAACTGCTG GATATGGTAT ATCCTACCGA TAATATGGAT CAGATGATTT CCGGTATGAG CCAGATGTAT ACTTTCTATC TGACTGACCT CAGCGATGTA ATGAGAGCGG CATTGACAAA GGAACAACAG CTGATCATGA GAATGATGAA TGATCCGAGA CTGGATAAAG ATACACAGCG TCATCTGAAA GATCTGAACT ACAAGATCAA TAAGATCGGT GAAAAAGACC TGAGATTTTA A
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Protein sequence | MLRLKLSPGV WLLSCVLLAA SVQATAQRKK KKDKETTPAE IKADTTVGKK PAPSKLKKYS DVITKDMRTD TGFIIVHAKE DEYYFEVPLS VMGKDILIVN RVAEASVDMR NGNWGLTGDQ IGEAVYRFEK ARNNNLYLRR LSFSEYSGDT SKPMYTSVQR NNVQAIAAVF PIVAYNADSS AVVLNMSEFL SSDNDITYFS KPLFKTRAGM GAQQNDRSYV KYVHAYPTNV EVRAFKTYAA GLNPTSANYS VELNSSMVLL PEKMARPRLQ DKRVGYFTIS HKDFDANPQG VTNTTYAVRW RLEPKPEDVE KYKRGELVEP VKPIVFYIDP STPKKWIPYL IQGVNDWQAA FERAGFKNAI YAREAPSRQE DSTWSLEDAR HSAIIYRPSS IANAMGPNVN DPRTGEILES HIFWYHNVMS LLQKWYFVQC AAVDTGARKL VFDDKLMGDL IRFVSSHEVG HTLGLMHNFG SSSTVPVENL RNKAWVEKYG HTPSIMDYAR FNYVAQPEDN ISRAGLYPRI NDYDKWAIEW GYKWRDNVKD EYEEQKLLTP IVTDSLKNQR LWFGSEMEPL DPRCQNEDLG DDAMKAGTYG IMNLKRIIKN LGQWTYEPEK DYTNMRNMLT AVYDQYGTYI GHVVRNIGGE YHTEKIAGQP GATYEVVEYK RQKEAVAFLD KELFTTPEWL NEKSLMDKIP DKFGIDLSEV QRGVLNGILN RFRMTSMLAA QHDGKGTGKV YTADELMLDL DKIVFRELYE GKSVSFYRRN LQKIYINKLL DMVYPTDNMD QMISGMSQMY TFYLTDLSDV MRAALTKEQQ LIMRMMNDPR LDKDTQRHLK DLNYKINKIG EKDLRF
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