| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4494 |
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| Symbol | |
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| ID | 8360667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 5590464 |
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| End bp | 5592818 |
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| Gene Length | 2355 bp |
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| Protein Length | 784 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644966649 |
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| Product | protein of unknown function DUF214 |
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| Protein accession | YP_003124137 |
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| Protein GI | 256423484 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0599884 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCCGGA ACTACGTTAT TATCGCCTTC AGGAATCTGA AACGCAATTT CAATTATGCC
GCGCTGAATG TTATAGGGCT GACTCTGAGC ATTGCCGCCT GCCTGATCAT ATTCCTCGTT
ACCAAAAATG AACTGACATA CGACCTGCAT CACCACAAGG CAGAAAGGAC TTATCGCGTA
ACCTTACATG CACTGGATTA CAACCCCAGC GTATCCATGG CGATTGCACC CGCTATGCGG
ACCTCCTTTC CGGAACTGGA AACGGTGGCC CAATATCTTC CCAGGACGGA CGCCTTTGTA
AAAGTGGGCG AAGCCCGTTA TAAGGAAAAA GAGTTCGCTT ATGGCGATCA ATATATGCCG
GAGGTATTCG ACTATACCTG GCTGAGAGGA TCGGCTAAAA CAGCCCTCTC TGAGCCCAAT
ACGGTAGTAC TTACCGAAAG CCTGGCACAC AAATATTTCG GCTCACAGGA TCCTATGGGA
CAGGTACTGC GGCTCAATAA CCATTTTGAC CTGAAAGTCA GCGGTGTCAT CAAAGACCTA
CCGGCTAATA CCAGCCAGGT GTTCGGATTC ATGATATCCT TTGCGACTAT ACAAAAGGAA
ATGGGCAGGG CGATGGAAGA GTTTTATGCC ATTGCCGGCG GACAAACATT CATCGTCACA
CCGCCTAATT TCGATATCAG CAAACTGCAA AGCCGCATGA AACCTTTTAT TAAGGATCAT
TGGGGCGCGG AGACTGCGGA AGGTGCAGAA CTGCCTTTAC AGCCGTTAAA AGATATTCAT
TTTGACCAGC GATATATTCA GAGTACAACG GCTTCCCGTC AGACGTACAT GGCACTGATC
GCCATTGCAA TATTTATTAT CGTAACAGCC TGTATCAACT TCATCAACCT GGCTACGGCA
CAGGCAGTGA AACGTGCCAA AGAAACAGGG GTCAGGAAAG TACTGGGCGC CAATCGTGGT
CAGCTGATCA GGCAGTTCCT GGGCGAAACA GCCATCCTGG TATTCGCCAC CATACTGGCG
GGTCTGATTG CCGCTTACCT GGCTTTGCCG CCCGTTGCTG CCGCCATGGA TGTACATATT
GGCATCCGGC AGTTAAATCA ACCCATCGTC TATCTCCTGC TGCTGGCACT GGGAGTGGTG
ATAGTATTGC TGGCAGGTCT TTATCCTGCC TTTGTGCAAT CTTCTTTCCA ACCGGCGCTG
ACCATGAAGG GTGCAGGCAA ACAAACTTCC GGAGGACTGA GTCTGCGTAA ATCGCTCGTA
TTTGTACAGT TCCTTGTATC ACAGGTGCTG ATCATCGGTA CACTGGTTGT CGCCAAACAG
ATGGACTTCT TTAAAAACCA GGACCTGGGA TTTGATAAAG AAGCGGTTGT GACCATCCCG
CTGATGAACA GGGAAACCCA ACAGGTATTG GGACAGCAAC TGAAAACGAT CAACGGGGTG
AAAGAAATCA GTTTCTCTTC CGCAGCTCCT TCCTACAACA ATAATTATGC ACCGTTCAGT
TGCCCGGAAA GAGGCGTTTC GAAAGATGAT GTCACAGAGG TAAGATTCAT CGATGATCAT
TATCTGCAAT TCTTCAATAT CAAACTGCTG GCAGGTACCA ATGTGTCGAA TGTGAAGGAT
AAAGATTCCC TCAGACAGGT AGTTGTGAAT GAGACCCTGC TTCATAAACT GGGACTTAAA
ACACCGGAAG AAGCAATTGG CATGAATATC CAGTTTGCAG GTGATAAGGT CACTATCAAT
GGTGTGGTAC AGGATTTCCA GAGTGAATCC AAACACAAGG AAAGAAGACC CTGTATCCTG
ATCGGATTCC CAAGAGGTTT TAACGTTGTC AGTGCAAGAC TGTACTCTAA AGGTATGCAC
GCTACCCTGA CACAGATAGA ACAAAAATGG GCGGCTTTAT ACCCTGATGG CCTATTCGAT
TATGAATTCC TGGATGACCA TATCGCGGCA TTATACAAAC AGGAACAGAA AGTATTTAAC
GCTTACCAGA TCTTCTCCAT CCTGGCCATC GTCATTGGTT GTCTGGGGCT ATACGGATTA
GTTGCATTTG CAGCTGTACA AAGGAATAAA GAAGTGGGCA TCAGAAAGAT CCTGGGGGCT
TCCGGTACTG ACATTGTGAC CTTGTTGGGA AAAGAATTTA TTCTCCTGAT CGCGGTTGCC
TTCCTTGTGG CCACGCCACT CTCCTACTTC CTGATGCATA ACTGGCTGGG CAACTTTGCG
TATCACATTT CCCTGCAACC AGGCATATTC TTTATCGCGC TCAGCTGCTC TGTAGCCATC
GCCGCTTTGA CGATCGCACA CCAGTCTGTG AAAGCAGCTG TCTCCAATCC ACTCAAAAGT
ATCAAAACAG AATAA
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| Protein sequence | MFRNYVIIAF RNLKRNFNYA ALNVIGLTLS IAACLIIFLV TKNELTYDLH HHKAERTYRV
TLHALDYNPS VSMAIAPAMR TSFPELETVA QYLPRTDAFV KVGEARYKEK EFAYGDQYMP
EVFDYTWLRG SAKTALSEPN TVVLTESLAH KYFGSQDPMG QVLRLNNHFD LKVSGVIKDL
PANTSQVFGF MISFATIQKE MGRAMEEFYA IAGGQTFIVT PPNFDISKLQ SRMKPFIKDH
WGAETAEGAE LPLQPLKDIH FDQRYIQSTT ASRQTYMALI AIAIFIIVTA CINFINLATA
QAVKRAKETG VRKVLGANRG QLIRQFLGET AILVFATILA GLIAAYLALP PVAAAMDVHI
GIRQLNQPIV YLLLLALGVV IVLLAGLYPA FVQSSFQPAL TMKGAGKQTS GGLSLRKSLV
FVQFLVSQVL IIGTLVVAKQ MDFFKNQDLG FDKEAVVTIP LMNRETQQVL GQQLKTINGV
KEISFSSAAP SYNNNYAPFS CPERGVSKDD VTEVRFIDDH YLQFFNIKLL AGTNVSNVKD
KDSLRQVVVN ETLLHKLGLK TPEEAIGMNI QFAGDKVTIN GVVQDFQSES KHKERRPCIL
IGFPRGFNVV SARLYSKGMH ATLTQIEQKW AALYPDGLFD YEFLDDHIAA LYKQEQKVFN
AYQIFSILAI VIGCLGLYGL VAFAAVQRNK EVGIRKILGA SGTDIVTLLG KEFILLIAVA
FLVATPLSYF LMHNWLGNFA YHISLQPGIF FIALSCSVAI AALTIAHQSV KAAVSNPLKS
IKTE
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