| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4042 |
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| Symbol | |
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| ID | 8360215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 5029028 |
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| End bp | 5029915 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644966215 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003123704 |
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| Protein GI | 256423051 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.600459 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0950634 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGGTG TCATGCATCC CTGGGAGTCT CCTCATTTTA TGGTTGGTGG TGATCATCAG
TCGCCTCGTT TTAACGCGTT CACGATAGAA GAACGGTTGG CCTCCGGCAT CACTTACCCC
ACCTTCTTGC GCCGGGATTT TTATAAAATC ATGCTCTTTC ACGGGGATGC CGTGTTCCAT
TTCGGAGACG AAAGCATTGC TGTCAGCGGT GACACTTTGT TGTTCTTTCA CCCTCGTTTG
CCATATACTT ATGGCGACAT CAAAACTGAC ATTTCAGGGT ACTGTTGTGT GTTCACCGAA
GCGTTCTTCC AGGAGTACTT CAGGGGGAAA CTGGACGACA TTCCCTTATT TCAGTCAGGA
GCGAAGCCTG TATTTTCACT TGAAGCTGAA GCGATTAAAG AAATAACTAG TTCTTTTGAC
CGGATAATCA GAGAGTTAAG GAGTGATTAT ATGTTTAGAT TTGAACTGAT CAGAAGCTAC
GTTATGGAGC TTATATATAA CGCTATGAAG CTCGCTCCCT TCAAAAATAC CATGCCCGAA
ACTAACGCCA GCGCTCGCAT TACCAGTGTA TTTTTAGAGT TGCTTGAGCG ACAATTTCCA
GTGGATGTTT TCTCCCCGAG AGTGCTCTTA CGGACCCCGA AAGACTTCGC CGAGCGACTC
GCTATTCATG TCAATTACCT GAACCGGGCA GTCAAAAAAG AGACGGCTAA GACCACCTCT
GAACTCATTT TCGACCGACT CATTTCAGAG GCAAAAGGAA TGCTCCGACA TAGTAATATG
AATATCGCCG AGATCAGTTA TGCCCTTGGT TTTGAAGACC AGGCGCACTT CACCGCCTTC
TTCCGGAAGC GAACCGAAAT GAGTCCGTCT GCTTTCAGGC AGGTTTGA
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| Protein sequence | MNGVMHPWES PHFMVGGDHQ SPRFNAFTIE ERLASGITYP TFLRRDFYKI MLFHGDAVFH
FGDESIAVSG DTLLFFHPRL PYTYGDIKTD ISGYCCVFTE AFFQEYFRGK LDDIPLFQSG
AKPVFSLEAE AIKEITSSFD RIIRELRSDY MFRFELIRSY VMELIYNAMK LAPFKNTMPE
TNASARITSV FLELLERQFP VDVFSPRVLL RTPKDFAERL AIHVNYLNRA VKKETAKTTS
ELIFDRLISE AKGMLRHSNM NIAEISYALG FEDQAHFTAF FRKRTEMSPS AFRQV
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