| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3589 |
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| Symbol | |
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| ID | 8359756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4473205 |
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| End bp | 4474683 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644965759 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003123253 |
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| Protein GI | 256422600 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000864206 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.000240178 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAAAAA CGAATCGTCT TTTCATCATA TCTGCTGCAC TGGCGACATT GACGCTGGGC
GCATGTAACA AAGACCTGAA TCTGACGCCT CCATCCAACA CTACTGTTGG TAACCAGGGG
CAGGGTACTG CGGGTTCTTA TATCAAAGAT GCGACTACTG CGGAGGCAGC ACTTGCCAGC
TGTTACGGAT ATTTCCGTAA TGGTTCTTCA GAATACTATG TACTCGATTA TTTCAATATA
GGCGATGCAC AGTCTGACAA TGCTTACGCA GGTGCAGACA ACGCCGCCGG TTTTGAGATC
GACGAATTCC GTCTGCTTTC CACGAATGCC TGGGCCAGCC GTGACTGGGG TTACCTCTAC
AATCAGATCA CTGCATGTAA CTCTTTGATC GCAAACGTAC CAAATGTCAA CGATCCAGCA
CTGAGTTCCG GCCGTAAAGC ACAGATCATC GGTGAGGCAC AGTTTATCCG TGCACGCGCT
TATTTTGACC TGGTAAGGAT CTTTGGTGAT GTGCCGCTGG TATTGACGGA ACTGCCTACT
ATCACTGCTG ATAACCTGGA GCAGATCTAT CCGTTACTGT ATCCTGCACG TAAAAGTGCC
GACAGTGTTT ATGCACAAAT CAATGCTGAC CTGAAAGCAG CAGCGGAAGT AGTACCGACA
TCCGGTGTAA ATAAAGGATA TGTGAGCAAA GGTGCGGTGT ATACCTTACT GGCGAAAGTA
GCGGCTACCA AGAAACCGGT TAACTGGGCG GAAGTAGAGT CTTACACTAA CCAGGTAATT
GCGCTGGGGT ATAGTCTGCT GCCTGTGTAT GACAACCTGT GGGACGGTGC ACACGAAAAC
TCCGCTGAAT CCATCTTCGA ACTGAACTTC GACGGCTGGG ATACAGGTGG TAACTGGGGC
ACGAGTATGT TCCTGGGTAC CGACTGGAAG AAATTCTGTA ATCCGAGTAA TGACCTTGTC
CGTGCTTATC AGCAGGAAAA AGATACCGTG CGTTTCAGGT CAACCATCAC TTTTGCAAAC
GTAAATGGTA AATGGGGAGA TGCCCGTCTG CCGTTGGATA GTTTCCCGTT CTTCTATAAA
ATGCGTAAGA CTGACGCCAG CCAGAACATC ATCATGTATC GTCTGGCAGA TGTATTACTG
CTGAAAGCAG AAGCGCTGAA CGAGCAGGGA GATGTAGGTG GTGCAAATGC GATCGTTACA
CAGATCCGTG AACGTGTGAA ACTGAAACAA CTGAATATTA CAGATCAGGC AGCGATGCGT
CTGGCCATTG AGAAAGAGCG TCGGCTGGAA CTTGCTTTCG AAGGTACCCG CTGGCAGGAC
CTCGTACGTA CAGATCGTGC GATTCCTGTA ATGCAGGCGG TGACAGATGG CAAGGGTGTG
AGTCTGGGTT ATCACCTGAC GGAGAAGAGT CTCTTATGGC CTGTTCCGCA GAGTGAGATG
GACCAGAACG CCAATCTGAT ACAGAATCCT GGCTATTAA
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| Protein sequence | MKKTNRLFII SAALATLTLG ACNKDLNLTP PSNTTVGNQG QGTAGSYIKD ATTAEAALAS
CYGYFRNGSS EYYVLDYFNI GDAQSDNAYA GADNAAGFEI DEFRLLSTNA WASRDWGYLY
NQITACNSLI ANVPNVNDPA LSSGRKAQII GEAQFIRARA YFDLVRIFGD VPLVLTELPT
ITADNLEQIY PLLYPARKSA DSVYAQINAD LKAAAEVVPT SGVNKGYVSK GAVYTLLAKV
AATKKPVNWA EVESYTNQVI ALGYSLLPVY DNLWDGAHEN SAESIFELNF DGWDTGGNWG
TSMFLGTDWK KFCNPSNDLV RAYQQEKDTV RFRSTITFAN VNGKWGDARL PLDSFPFFYK
MRKTDASQNI IMYRLADVLL LKAEALNEQG DVGGANAIVT QIRERVKLKQ LNITDQAAMR
LAIEKERRLE LAFEGTRWQD LVRTDRAIPV MQAVTDGKGV SLGYHLTEKS LLWPVPQSEM
DQNANLIQNP GY
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