| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3534 |
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| Symbol | |
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| ID | 8359701 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4398928 |
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| End bp | 4399857 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644965705 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003123199 |
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| Protein GI | 256422546 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0611769 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.445851 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAGC AATTGGAGAC ATTAACAGAT TTTTATCGGG AAAGGTCTTT TATCAGCTTC
CCGTTCAGTA CGGAAGACGT AGGGAAAGGA AAGTCTCATT TCAATGTAAA TACCCGCAAA
TATTGCAACT TCAAAACTCC CTACAACCGC AGGGACTTCT ATAAAATAAC ACTGATCTAC
GGTAAAGGTG AACTGAGCTA TGGTGGTAAT TCCATTACCA TTGACCGCCC GGCATTATTG
CTCCCCTGTC CGTCCGTGCC TTATGCCTGG GCTAGTCTCA GTGGGGAACA GGATGGTTTC
TACTGCCTCT TCAACCAGGA GTTCTTTAAT GAACACTACC AGTTCGATAT CTTTAAACGC
TCCCCATTGT TCAAACCATG GAGCGAACCT GTCATCTTCC TGGAAGAAAA ACAACGCGCA
CAGATACATG GCTATTTTGA ACAGATGATG GAAATGGCGC ACAGCGATTA TCCATATAAA
TACGAAGCGC TGCGTAACCT GTTGTGTTTG CTGATGCACT CACTGCTGGT CGATAAACCG
GTAGCTGAAC CTGGTGCTGG TGAATTATCC GCCTCTTCCC GTTTGCTGAA ATCCTTTGAT
GAACTCTTAC ATCAACAGTT CCCGCTGGAT TCTCCTGCAG ATCCATTGAC CATGAGGACG
CCGGCTGATT TCGCCAGTTC CCTGAATGTA CACGTGAATC ACCTGAATCA TGTGGTCAAG
AGTATCACCG GACAAACAAC CACTCATATT ATCAAGAGCC GTATTCTCGA AGAAGCCAAA
ACATTATTAC TCAATACACA ATGGGACATT TCCCAGGTAG GATACTGCCT CGGTTTCGAA
GATCCTGCTC ACTTTAATAA CTTCTTTAAG AAATCTGCAG GGATCACCCC CTTACAGTTC
CGGCAGTCAA AGATGAGTGT GCTTATTTGA
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| Protein sequence | MSQQLETLTD FYRERSFISF PFSTEDVGKG KSHFNVNTRK YCNFKTPYNR RDFYKITLIY
GKGELSYGGN SITIDRPALL LPCPSVPYAW ASLSGEQDGF YCLFNQEFFN EHYQFDIFKR
SPLFKPWSEP VIFLEEKQRA QIHGYFEQMM EMAHSDYPYK YEALRNLLCL LMHSLLVDKP
VAEPGAGELS ASSRLLKSFD ELLHQQFPLD SPADPLTMRT PADFASSLNV HVNHLNHVVK
SITGQTTTHI IKSRILEEAK TLLLNTQWDI SQVGYCLGFE DPAHFNNFFK KSAGITPLQF
RQSKMSVLI
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