| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3436 |
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| Symbol | |
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| ID | 8359602 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4282886 |
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| End bp | 4284850 |
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| Gene Length | 1965 bp |
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| Protein Length | 654 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644965609 |
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| Product | peptidase C14 caspase catalytic subunit p20 |
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| Protein accession | YP_003123104 |
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| Protein GI | 256422451 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0303831 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.42881 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACATC TGCTATTGGT AATATTACTG CTCGTTGCAG ACACATTGTA TGCACAGCAA
CCGCCCAACC GCCACGCACT GATCATTGCC ATCGGCAATT ATCCTCCAAA TGGCTGGGCA
CTGCTGAATA CAGCCAATGA TACGACACTT ATCAGGACCG TCCTGCAGCG CCAGTCCTTC
AGAAGCGCAG ATATCAGCAT ACTGGTCAAT CAAAAGGCCA CTATCGAAGG TATTGATAGT
GCATTTGGAC AGTTGATCAA AACAGTTACG CCGGGTGATG TAGTATTCGT AGCATTTTCT
TCGCATGGGG AACAGGTGGA AGATGATAAT CGTGATGAAA CAGATTGCCT GGATGAAAGT
ATCGTAACAT ATAATGCCAT ATTGCCGGAA AACGCAGATA AAAAAGACTA TCCCAAAAAC
CAGTCACAAT TTCTGCGGGA TGACAAAATA GGCGAATACC TTCGCCGTCT GAGAAAAAAA
GCAGGAAAAG ATGGAGATGT CGTTTTTTTT ATAGACGCTT GTCATTCAGG CACCGGCGCC
AGATTTAAAA GCGGAGTAAG GGGAGATCAG CCTCCCCTTG TCTCCGCTAC TTTTAAAGAA
TGTTCCGGAA ACACAACAGA TACTACGCTG ATAGTAGATG GCCCCCAACG AAATAATGAC
GCCAATATGG CCAGCTTCGC CGTATTCTCC GCATCGCGCG CAGAAGAAGT TGCAGTGGAA
GTGGAAAATG GTGATGCGGA AAAGGTAGGT CCCCTGACAT TTGCGATGTG CAGCGCACTC
AGTACACTGG GAACAGCTGT TACCTACGGT TCTTTTTTCA GTATCATTGA AAGCAATATC
CAGTCCATAA ATCCCGGGCA ACACCCCGTT TTTGAGGGCA ACAGCGAAAA CCGGCTCTTA
TGGGGCGGCA GATATGTCCC TAAACCCACC TCTTTTGAGA TTGCACAAGT GCTGGAACCC
GACAAAATAC TTGTCAAAGG AGGCGCATTA GCCGGCCTTG ATAGTGGGGC CTTGGTATCG
CTGTATCCCT ATAATACCGT CGATACAACA GCGGGGCAAC TCATACAAAG AGGGCGCGTT
GTAAAGGCCG ATCTATATCA AAGTATTGTT CAACTGTACG GAAAAAATAA CAATGGGAAT
ATGCAGGGAT GGATATTTTT GAGTACGCCC GTATTCAGCC AGCGCCCTGT CAGCATCAGA
TTGTCAGGGT ATTCCCGTAA GGAAGCCGAA GAAATAAGGA ATACCTTCGC AGGCTGGCCC
CTGATCGGTT TTAAAGATTC CGCAGACCTC ATTCTGGTTA AAGGACCCTC CCGTGATAGT
CTCGTAATTG CCGCCACCGG AATGTGCTTT GGTACGATTG TCCCCGCAGT AGCACATAAG
GACAGTCTTA AAGCAATCGT CAACCGCTAC CTGCAGTATG CATTCCTGGC CGGATTGAAT
ATCACGGATC CTATCGTTGA TCCCGAAGTG AAACTTGTCA GGTTGAAGAA TGGAAAAATC
GATACCGCAT CCGCATATAA CAAGATAAAC GGGACCTACC AGTTTTCAAA GACAGATGCG
ATATTGGTCT GGGTGAAAAA TCACAGTACA GTGCCCATTT ATATTAACCT GATCGCCCTG
CAGCCAGATG GTGTGATCGC TCCGTTATTT CCCAATAAAC AGCTCGATAA TCCCATCTAC
TCGTCAGATC TGCAGATACC CGCACGGGGA GAGCATATCT TTACCGAATA TATTATAGAA
TTTGATCCGC CATTTGGTAC ACAGATCTTT AAACTGTTTG CCAGTAAACA AATGCTTGAT
CTGGAATACC TGGCAGGATT CAAAGGTCTT GCCACCAAAA GCAACATGCC GGTGCTGGAA
AAGATATTCA ATTATTCCTA CGAATTAGGT CAGAAAAACA AAGCATCCCT GAGGGGACAG
ACTGAGGGCG TTATACAGAG CATTATGCTT AACATCAAAG ATTAA
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| Protein sequence | MKHLLLVILL LVADTLYAQQ PPNRHALIIA IGNYPPNGWA LLNTANDTTL IRTVLQRQSF
RSADISILVN QKATIEGIDS AFGQLIKTVT PGDVVFVAFS SHGEQVEDDN RDETDCLDES
IVTYNAILPE NADKKDYPKN QSQFLRDDKI GEYLRRLRKK AGKDGDVVFF IDACHSGTGA
RFKSGVRGDQ PPLVSATFKE CSGNTTDTTL IVDGPQRNND ANMASFAVFS ASRAEEVAVE
VENGDAEKVG PLTFAMCSAL STLGTAVTYG SFFSIIESNI QSINPGQHPV FEGNSENRLL
WGGRYVPKPT SFEIAQVLEP DKILVKGGAL AGLDSGALVS LYPYNTVDTT AGQLIQRGRV
VKADLYQSIV QLYGKNNNGN MQGWIFLSTP VFSQRPVSIR LSGYSRKEAE EIRNTFAGWP
LIGFKDSADL ILVKGPSRDS LVIAATGMCF GTIVPAVAHK DSLKAIVNRY LQYAFLAGLN
ITDPIVDPEV KLVRLKNGKI DTASAYNKIN GTYQFSKTDA ILVWVKNHST VPIYINLIAL
QPDGVIAPLF PNKQLDNPIY SSDLQIPARG EHIFTEYIIE FDPPFGTQIF KLFASKQMLD
LEYLAGFKGL ATKSNMPVLE KIFNYSYELG QKNKASLRGQ TEGVIQSIML NIKD
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