| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3425 |
|---|
| Symbol | |
|---|
| ID | 8359591 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 4263397 |
|---|
| End bp | 4265901 |
|---|
| Gene Length | 2505 bp |
|---|
| Protein Length | 834 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 644965598 |
|---|
| Product | Peptidase M1 membrane alanine aminopeptidase |
|---|
| Protein accession | YP_003123093 |
|---|
| Protein GI | 256422440 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0308] Aminopeptidase N |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.279831 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTCTGT TAACTAATGT GTGCCGTAGC GCAGTGATAG CTGCCTGCCT ACAGGTATAC
CGGCTGTCTG CTGCCGCATT TCCGGCAGAC GCCCCTCCGG AGTATGCCCG CCTGGTGCAT
ACAAAACTGG ATATATCGTT CGATTATCCG CAGCACCTCG TACATGGAAA AGCCTGGATC
ACCTTGCAGG CAGCCCTGCC CCGGCAGGAT TCCCTGATAC TGGATGCCAA AAGCATGGAC
GTGACAGCCG TCACCTTGCA AAAAGGTAAA GAAAGCCTGC CTTTGCCGTA TAAGTCGACC
GGCGCACAAT TGCTGATAAA GCTGGACAAA CCATACAGCA AAGGCGAACA GTACACGGTA
CACATTGCAT ACACCGCTAA ACCTGATGCA TTGTCTGGCG GTCTTGCTGG TCCGGTACAG
ACCACAAAAG GGATTTACTT TATTCCCGCA GGAAAAGACA ATGAAGGTCC TTTGTTCCAG
GTATGGACAC AGGGCGAAAC CTCCGGCGCT TCTTCCTGGT TTCCCACCAT CGATAAACCG
GATCAGCGCA GCACATCAGA GATCAGTATC ACTGTACCGG CCAAATACCG CTCCCTGTCC
AATGGCGTCT TAAAAGGACA ACTGGAGCAG CCAAACGGTA ACCGTACAGA TACCTGGTCA
ATGACATCGC CACATGCGCC TTATCTGTTT ATGCTGGCAG TAGGAAAATT CGAAGTCGTC
CATGACACCT GGAACGGACT GCCGGTAGAT TACTACATGG AACCGGAATA CAGTGCCTAC
GCAAAACAGA TCTTTGGCGC TACGCCGAAG ATGCTCAGTT TCTTCTCTGA AAAACTGGGC
TACAAATACC CCTGGCCCGG GTACGCACAG ATCGTCGTGA AGGATTATTT CTCCGGTGGT
ATGGAAAATA CAACCGCAAC CCTTTTCGGC GATCTGCTGC GCAGGAATCC AAGGGCCCTG
CTGGGAGATG AAGACGCAAA ATGGATTATT CCGCATGAGC TTTTTCATCA ATGGTTCGGT
GACCTCGTTA CCTGCGAAGA ATGGTCGCAA CTCGCCTTAA ATGAATCCTT CGCCAACTTC
GGCGAAGTAC TCTGGGGCGA ATACGCCTTC GGCAAAGACG CGGCGCACCA CCATTCATAC
GAAATGATGT TAAAGTATTT CCAGCAGCAG AAAGAAGGAC ACGATCATCC CCTGATATAT
AAAACATACA AAGATGAAAC AGAGCTGTTT GACGCTGTCA CCTATGAAAA AGGAGGCAAC
ATACTTAGTA TGTTACGTGA CCTCGTTGGA GAAGATAAAT TTTTTGCCGC CCTGCGGAGC
TATCTGTCTG AAAATGCTTT CAAAGCCGTG GATGCAGAAG ACCTGCGGAC AGCATTCGAA
AAAGCCAGCG GTAGCGACCT GAAATGGTTC TGGGATCAAT GGTTCTATCG CGACGGTTTC
CCGGTACTGG ATATCTCCTA CGAATACAAT GATGCCGCCG GCACTGTAGC CATAAAGATC
GCACAGCAAC AAAAAGGCGA CATCTTTATC CTTCCCCTGA AAGTGGACCT CTACACAAAT
GGTAAACGTA CCACACAAGA CATAAAGGTA GATAGCCGCA CACAGGTATT CACCCTTTCT
TATCCTGATA AAAACACCAG ACCTGCACTG GTAAACGTCG ATGCAGGTAA ACAACTGATC
TGTAAGAAAA CTGACAAAAA AACGCTTGAA ACATTCATTT ACCAGTATAA ATACGCCGGT
AATTACCTGG ATAGAAGAGA AGCCCTCAAA GCCTGTGTAC AGGCCCAGGA TACCAGCGTA
CTGGCTCGTG CATTTCTGCG GACAGCCCTC CATGATACCA ACGACGGACT CCGGAAAATT
GCTGTACAAT ACACAGACCT TGAAAACGGA GACACGCGTA AAACATACGC CGGTATCATC
GACAGCCTTG CACGATATGA TACGGAACCA CTGGTACGCC AGGCCGCTGT AAAAGCCTTA
CGCAGCCTGA AAGATCCTGC TTACAAAGAC CTTTTTGTAC AGTCGCTGAA AGACTCCTCT
TATAATGTAG TCGCTTCCGC ACTGATAGGA CTGAATAAGC TGGATAAACA ACTGGCAGCA
CAACAGCTGA CACCCTTCCT GGAGGATAAC GAAATGGCCA GTACGATATT GGATATCTAC
CTGGGCAACG AAGATCCTAA GGATAATCAG TCTTTTCTAT CCATTGTATC CAGACAGCGG
GATCGCCAGA AACAGGACTA CCTGGTGAAA TACCTGCGCT ACCTGGCTAC GCTGAATGAT
GTGGACGCGA TTGACTACGG ACTGAAACAG TTCCAGCAGA TCGCAGCTTC CATTGACGAT
CAGCTGATGG ATAAAAAAGG TATGCTGGGC AACCTCGAAC TACTGGCCGG ATTCAAAATG
GATCTGCTGA AAAAAACAGC CGGTAAAAAA GAACGCTCTT CCCTGGAAAA GCAGGTAGCC
AGCATACAAC AAACCATTCA TGACTTTTCC CTTAATATGG ATTGA
|
|---|
| Protein sequence | MGLLTNVCRS AVIAACLQVY RLSAAAFPAD APPEYARLVH TKLDISFDYP QHLVHGKAWI
TLQAALPRQD SLILDAKSMD VTAVTLQKGK ESLPLPYKST GAQLLIKLDK PYSKGEQYTV
HIAYTAKPDA LSGGLAGPVQ TTKGIYFIPA GKDNEGPLFQ VWTQGETSGA SSWFPTIDKP
DQRSTSEISI TVPAKYRSLS NGVLKGQLEQ PNGNRTDTWS MTSPHAPYLF MLAVGKFEVV
HDTWNGLPVD YYMEPEYSAY AKQIFGATPK MLSFFSEKLG YKYPWPGYAQ IVVKDYFSGG
MENTTATLFG DLLRRNPRAL LGDEDAKWII PHELFHQWFG DLVTCEEWSQ LALNESFANF
GEVLWGEYAF GKDAAHHHSY EMMLKYFQQQ KEGHDHPLIY KTYKDETELF DAVTYEKGGN
ILSMLRDLVG EDKFFAALRS YLSENAFKAV DAEDLRTAFE KASGSDLKWF WDQWFYRDGF
PVLDISYEYN DAAGTVAIKI AQQQKGDIFI LPLKVDLYTN GKRTTQDIKV DSRTQVFTLS
YPDKNTRPAL VNVDAGKQLI CKKTDKKTLE TFIYQYKYAG NYLDRREALK ACVQAQDTSV
LARAFLRTAL HDTNDGLRKI AVQYTDLENG DTRKTYAGII DSLARYDTEP LVRQAAVKAL
RSLKDPAYKD LFVQSLKDSS YNVVASALIG LNKLDKQLAA QQLTPFLEDN EMASTILDIY
LGNEDPKDNQ SFLSIVSRQR DRQKQDYLVK YLRYLATLND VDAIDYGLKQ FQQIAASIDD
QLMDKKGMLG NLELLAGFKM DLLKKTAGKK ERSSLEKQVA SIQQTIHDFS LNMD
|
|---|
| |