Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3328 |
Symbol | |
ID | 8359494 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 4091488 |
End bp | 4092297 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644965501 |
Product | Phytanoyl-CoA dioxygenase |
Protein accession | YP_003122996 |
Protein GI | 256422343 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG5285] Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.000638889 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCTGTCG CTTATCAAAC ATTTACACTC GGTAATGCGC TTACCGAGGA GCAACAATCA TTTTTTGAAG AAAACGGTTA TATCCATTTC TCTAATTTTC TGACGCCGGA GCAGGTGCAG GAGATCGTCA ACGCATCAGA AGAGGTGCAG CAGAGATGGA TTTCGGGGAA CGTAGAGAAG GTGAATGGAG TACCGGTGAA ATATGGCAAA GATCTGGACG GTCAGCCGAT AGTACAACGA TTTGCTTTTA TCAATCAACA TACGCGTGTA CTTTCAGATC TGCTGAAGGA CAATCGCTTA CAGACCCTCT TACAATTAAT AGGCCCCGGC GCCCGTATCG GAGAGAATGA AAAGGATGGG ATGGTGTTGA ATCATTATGT GAATGGTCCG GAGAGCACTT TCACTAAAAT GGGTTGGCAT ACGGATGGTT TACGTGATAT CTTCCTGCAT GGGAAACTAA ACCCCATGCT GAATGTAGGT ATCCACCTGA GTAATCTTCG TCCGGAAAAC GGCGGATTGC GCATCATTCC TGGTACACAT AGACAGAACA TCTTCAGTAT GCTGTTCAGA AAGAAATACT TTATCGGTCA CAAACCCGAT AAACACGAAC TGGCAATCGC GCCCAATGCA GGTGATCTTA CTGTCCATGA TGGTCGTCTC TGGCATCGTG TAGCCCAGTC AAATGTAATA GGAGAGGCCA GCCGCAGACG CGTGATCTAT GTGCCTATCA TTGCCGGAAA ATATGAACCT AAACATGAGA ATAGTCCGAC CCTCCTGTAT CAAAGACTGG CCGGTGTTAT CCTGAAATAA
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Protein sequence | MSVAYQTFTL GNALTEEQQS FFEENGYIHF SNFLTPEQVQ EIVNASEEVQ QRWISGNVEK VNGVPVKYGK DLDGQPIVQR FAFINQHTRV LSDLLKDNRL QTLLQLIGPG ARIGENEKDG MVLNHYVNGP ESTFTKMGWH TDGLRDIFLH GKLNPMLNVG IHLSNLRPEN GGLRIIPGTH RQNIFSMLFR KKYFIGHKPD KHELAIAPNA GDLTVHDGRL WHRVAQSNVI GEASRRRVIY VPIIAGKYEP KHENSPTLLY QRLAGVILK
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