| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3236 |
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| Symbol | |
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| ID | 8359401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 3988918 |
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| End bp | 3991860 |
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| Gene Length | 2943 bp |
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| Protein Length | 980 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644965408 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_003122904 |
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| Protein GI | 256422251 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATTTAA ACTGCAAAAC ATATTTCAGC TACCGGTACG GTACATTTCC GCATGAGCTG
CTGGTGCTAA CAGCATCTGA ATTGGCCGTG AAAACGATGG CATTGACCAA CATTAACAAC
ACCTCCGACA TCTGGGACTT TGTGAGTGCC TGTAAGCGGG CAGGCATTAA ACCGGTAGCG
GGCGTGGAGA TACGCAACGA AGATACGCTG TGCTACCTGC TGCTGTCCCG CAACAATGAA
GGTTTTTTCC AGATCAATCG TTTTCTCTCC ACACATCTTA TTGCCAAAGC GCCTTTTCCT
GACCGGGTGG AGCTGGGAGC GGATGTTTTT GTGATCTATC CTTTTAACAA AGAATGGCTG
CAAAGCGAAC CGCTGCTGAC GGTGAATGAA TACATGGGGG TGCAGACAAC GGAAGTAAAT
AAGCTGTATG GCGTGGATAT GCAGCAATGG GGCAGCCGGT TGCTGATGCG TCATCCGGTA
ACGTTTCAGG ATAAAGTGCA TTACAATGTA CACCGCCTGC TGCGGGCTAT TGATAAGAAC
ATCATACTCT CCAAACAAGA AGACACCCAC AAGGCCGGTG AGCATGAAAC CTTTATGCCT
CCTGCTACAC TGCTGCTGGC TTTTGAGGCG TATCCGCAGA TCATCATCAA TACCTTTCTG
CTGATGGAGA AGTGTAGCCT GGACATGGAC TATGAAGAGG ATAAGAATAA AAAACACGCC
TCAGCCAGCA AAGAAGACGA CCGGCAGCTA CTGGAAAAGC TGGCGACGGA CGGGCTGCTG
TACCGCTATG GAAAAACCAA TACGGTGGCA CGGGAGCGGG TGCTGAAAGA ACTGAAGATC
ATTAACGACC TTAATTTCAA CGCCTATTTT CTTATTACCT GGGAGATACT GCAATACGCC
CGGAGCAGAG GATTCTTTCA CGTAGGGCGA GGGAGCGGAG CCAACTCGAT AGTAGCTTAC
TGTATGCAGA TCACCGATGT GGACCCGATA GAGCTGGACT TATACTTCGA GCGCTTTTTA
AATCCTTACC GCACCTCGCC GCCTGATTTC GACATCGACT TTAGTTGGGT GGACCGGGAT
GATATTATTG ACTTCGTATT TAAAAAATAC GGGAAAGAAC ATGTAGCCCT GCTGGGTATG
TATACCACGT TTCAATACAA AGCCACCGTG CGGGAGCTGG GGAAGGTATA CGGTCTGCCA
AAAACAGAGA TAGACCTGCT GGCGGAAGGG CGCTTGCAAT CGGACGATAA GGTACACGCA
CAGATACTGC GCTACAGTGA TCTGATAAAA GACTTTCCCA ACCACCTGAG CATACACCCC
GGCGGTATGC TGATCAGTGA AAATCCCATT CATTACTACA CCGCTACCGA CCTGCCACCG
AAAGGGTTTT ATACTACACA GATCGACATG TTTGTGGCGG AGAATATATC GCTGTTTAAG
TTTGATATAC TGAGCCAGCG TGGATTGGGG CATATCAAGG ACACCGTAGA CCTGGTGCGC
AAGACCAGGG GCATAGCCAT AGACATACAC GACGTAGAAC TGTTTAAGCA AGACAAACGC
GTGGCACAGC AGATCAGGTC TGCCGATACC ATTGGCTGCT TCTACATAGA ATCGCCCAGT
ATGCGACAGT TGCTGAAAAA GCTGCGGTGC AGCGACTACC TTACGTTGGT AGCCGCCAGC
TCTATTATTC GGCCCGGTGT AGGACAATCG GGTATGATGC AGGAATACAT TTATCGCTAC
CACAACCCCG ATAAATTCGA ATACCTGCAT CCCAAGATGA AAGAGCTGTT ACAGGAAACC
TACGGCGTGA TGGTATACCA GGAAGACGTA ATAAAAGTGG CGCACCATTT CGGGGGGCTT
GACATGGCAG AATCGGACAT TCTGCGTCGC GCCATGAGTG GTAAATACCG AGGCACCAAG
CAAATGCAGC GGTTAGAAGA GCAGTTCTTC CTTAACTGTA AGGCAAGGGG CTACGACCCC
GGTATCAGTC GGGAAGTATG GCGGCAAATA TCCTCCTTTG CCGGTTACTC CTTCAGCAAA
GCGCACTCCG CCAGCTTTGC GGTAGAGAGC TACCAGAGCC TGTATCTGAA AACTTACTAC
CCCGTGGAAT TTATGGTAGC CGTGATCAAT AACTTTGGTG GATTCTACAA CCGGGCGCTT
TACTTTCAGC AACTGATAAA GCACGGAGCC ACGGTGTACA ACCCCTGTAT CAATAACTCC
GACTACCTGA CCAGCATAAA AAACGACATC GTTTATGTAG GATTTATACA CATCAAAGAC
CTGGAACGCG CATTAATGGA GAAAATACTG GAAGAAAGGG ACCGCAACGG AGCCTATCTT
CACCTCCAGG ACTTTATAGA ACGCACGCAA GTGCCGCCGG AGCAACTGAA TACGCTCATT
AAAGTAAACG CCTTGCGCTT TACCGGCAAA ACAAAGGGGG AACTGCTATG GGAAGCCAAC
ACCCTGCAGA AAACGAATAC CCGGCGCATA CCTGCGGGCC AATCGCTTTT TCAGGAGCCG
GAGATCAGCT TTCAGCTACC TGCTTTAAAG CAGAACCGGC TGAAAGACAT GATGCAGGAT
ATAGAGCTGC TGGGTTTTAC ACTGGAAAAC ATGTTCGAAC TGGTGGATGC CGATCCTTAC
CAGCACAAGC TGGCGGCGGA CATACCGGGC TGCGTACACC AAACGGTTAC CTGCCTGGTA
TACCTGATAT GCACTAAGGA CACTTACACC AAGAAGAACA AAGAGGTGAT GCACTTTGGT
ACCTGGCTGG ACGTAAAAGG CGATTGGGTA GACAGCGTAC ACTTTCCGGA AAGCGCCCGG
AGATATCCTT TTCAGAAGCG GGGGTTTTAC TTTATTACCG GGAAGGTAAT AGAAGAATTT
GGAGTGCATA CCATTGCCGT AGAACAGATG GAAAAGGCGG GGATAAAGAA GCTGAATAGT
TGA
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| Protein sequence | MYLNCKTYFS YRYGTFPHEL LVLTASELAV KTMALTNINN TSDIWDFVSA CKRAGIKPVA
GVEIRNEDTL CYLLLSRNNE GFFQINRFLS THLIAKAPFP DRVELGADVF VIYPFNKEWL
QSEPLLTVNE YMGVQTTEVN KLYGVDMQQW GSRLLMRHPV TFQDKVHYNV HRLLRAIDKN
IILSKQEDTH KAGEHETFMP PATLLLAFEA YPQIIINTFL LMEKCSLDMD YEEDKNKKHA
SASKEDDRQL LEKLATDGLL YRYGKTNTVA RERVLKELKI INDLNFNAYF LITWEILQYA
RSRGFFHVGR GSGANSIVAY CMQITDVDPI ELDLYFERFL NPYRTSPPDF DIDFSWVDRD
DIIDFVFKKY GKEHVALLGM YTTFQYKATV RELGKVYGLP KTEIDLLAEG RLQSDDKVHA
QILRYSDLIK DFPNHLSIHP GGMLISENPI HYYTATDLPP KGFYTTQIDM FVAENISLFK
FDILSQRGLG HIKDTVDLVR KTRGIAIDIH DVELFKQDKR VAQQIRSADT IGCFYIESPS
MRQLLKKLRC SDYLTLVAAS SIIRPGVGQS GMMQEYIYRY HNPDKFEYLH PKMKELLQET
YGVMVYQEDV IKVAHHFGGL DMAESDILRR AMSGKYRGTK QMQRLEEQFF LNCKARGYDP
GISREVWRQI SSFAGYSFSK AHSASFAVES YQSLYLKTYY PVEFMVAVIN NFGGFYNRAL
YFQQLIKHGA TVYNPCINNS DYLTSIKNDI VYVGFIHIKD LERALMEKIL EERDRNGAYL
HLQDFIERTQ VPPEQLNTLI KVNALRFTGK TKGELLWEAN TLQKTNTRRI PAGQSLFQEP
EISFQLPALK QNRLKDMMQD IELLGFTLEN MFELVDADPY QHKLAADIPG CVHQTVTCLV
YLICTKDTYT KKNKEVMHFG TWLDVKGDWV DSVHFPESAR RYPFQKRGFY FITGKVIEEF
GVHTIAVEQM EKAGIKKLNS
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