Gene Cpin_3235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3235 
Symbol 
ID8359400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3987766 
End bp3988908 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content50% 
IMG OID644965407 
ProductDNA-directed DNA polymerase 
Protein accessionYP_003122903 
Protein GI256422250 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAGAA GTGTAGCACA CTTCGACCTT GATGCATTTT TCGTATCCGT CGAATGTAAG 
AATAACAGCG CCCTAAAGGG CAAACCGCTG ATAGTAGGAG GGGGAGAACG CGGAGTAGCC
GCCGCCTGCA GCTACGAAGC CCGCAAATTT GGCGTACACA GCGCCATGCC CATGAGGATG
GCCAAACAGC TTTGTCCGCA AGCCATTGTA ATCGGCGGCG ACTACGAAGC CTACAGCAAG
CACAGTCGCC TCGTAACCGA GGTGATCGCT TCCAAAGTAC CGCTTTACGA AAAAGCCTCC
ATCGATGAAT TCTACGTCGA TATGACGGGC ATGGACAAAT TCTTCGGCAA TGCCAGACTG
GTGGCAGAAC TAAAGCAACT GGTACTCAAA GAAACCGGAC TGCCCATATC CTACGCACTG
GCCGGCAACA AACTCATAAG CAAGGTAGCC ACCAACGAAG TAAAGCCTAA CGGCGCCATA
CAGGTGTATC ATGGCACCGA AAAAGCCTAC CTCGCGCCGC TGGCGATCGA AAAAATGCCG
GGTATTGGTC CCAAACGCAG CGCCTTGCTG CGCGATCTGG AAGTGACCAC CATTGCCGCC
CTGGCCAACA TACCCAAATA CATGCTGGAA AAAATGTTCG GCAAAGAAGG GCATGATCTC
TGGCGAAAAG CCAATGGCAT AGACGAAACG CCGGTAATAC CCTACACTGA ACAAAAAAGC
ATTTCCACGC AGGATACGTT TACCAACGAT ACCATTGACA TGCGCTTTCT TGAAGCACAG
CTCGTGCGCA TGACGGAGAA GATAGGTTTT GAATTGCGGC AGCAGAATAA GCAGGCTGGT
TGCATAACGG TGAAGATACG ATACTCCGAT TTTAACACCG TTACGAAAAG CCATACCATC
GCTTATACCT CCGCTGATGC CGTGCTGCTG AAAACAGCCA AAGAACTATT CCACAAACTC
TACGACCGGC GGTTGCTGGT GCGGTTGCTA GGCATCAGCT TTACCGACCT GGTAGCGGGT
AATTACCAGA TCAATCTTTT CAGCGATAAA GAATCATCGA TCAAGCTGTA CCAAGCGATC
GACAGCATCA AAAATCAATT CGGAAGTGGC GCTATTATGC GAGCCAGGGG ATTAAGGAAA
TAG
 
Protein sequence
MERSVAHFDL DAFFVSVECK NNSALKGKPL IVGGGERGVA AACSYEARKF GVHSAMPMRM 
AKQLCPQAIV IGGDYEAYSK HSRLVTEVIA SKVPLYEKAS IDEFYVDMTG MDKFFGNARL
VAELKQLVLK ETGLPISYAL AGNKLISKVA TNEVKPNGAI QVYHGTEKAY LAPLAIEKMP
GIGPKRSALL RDLEVTTIAA LANIPKYMLE KMFGKEGHDL WRKANGIDET PVIPYTEQKS
ISTQDTFTND TIDMRFLEAQ LVRMTEKIGF ELRQQNKQAG CITVKIRYSD FNTVTKSHTI
AYTSADAVLL KTAKELFHKL YDRRLLVRLL GISFTDLVAG NYQINLFSDK ESSIKLYQAI
DSIKNQFGSG AIMRARGLRK