| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3206 |
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| Symbol | |
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| ID | 8359371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 3955928 |
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| End bp | 3959242 |
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| Gene Length | 3315 bp |
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| Protein Length | 1104 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644965378 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003122874 |
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| Protein GI | 256422221 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.165856 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACGAT TTTTATGCCA TAAGGGCGTA TACCTATTTG TGCTAACTAT TTTTGTACAC
GTTGCCGGCT TATTTGCTCA GGGGAAAGAC ATACCACCAC TTCAGCGTAA GGTAACACTG
GTGCTGAAGA ATGGAACACT GTTAGACGTT AAAAAAGCTG TTAAGGAACA GACCAACGTT
GAAATTACGG GAAGGTTTGA CCTTACAGCA GGGGGATTTA CGGTGGATGC CCACGGTGTT
ACGGTACCCC AGCTCTTAAA GGAAAGTTTT ACCCCGAAGG GTTATACCTG GGAACTAAGG
GACAGTATGG TGGTGCTCCG CGAACCAACA AAGAAAGATA GCAGTATTAC CAGCGCTGAG
CTGCCATTGC AGCCTACTAC ATTAACGGGT CTGGTAACCG ACACCACCGG CGAGGCCCTG
CCCGGAGCTA CGGTACGCGT GTATGGCCAG AACAGAGGTG TTAGTACCAA CCATGCTGGC
AGGTTTACCC TGCCTATTAG TAAGGCAGAT ACACTGCTCG ATATAAGCTT TATCGGGTAC
GAGAAGCAGC GCCTATTGCT CTCGCCTAAC CAGCGGTTTA TAGCCGTACA ACTGCATTTT
GCTGATAAGC GCCTGGATGA TGTTTTTGTT TCGGGCATGT CAGAAGCTTC CGAACGGTCT
ACTATAGGAT CGATTGATCA TTTAGACTTC ACCTACATTC AGTCGCTGGG CAACGACAAT
GCAGTTACTA ACCTGCAGGG TGCCGTTCCC AACCTGCTGG TGGAGCAAAC CAGCGGAGTG
CCCAACAGTA CGGTTTCGGT GCAATTGAGA GGGAGAAGCT CCTTCACCGG CAGAGCGGGA
CCGTTATATG TGATCAATGG CATACCCTAC GCGGGCAATC TATCAACGAT CAATCTTCGT
CCTTCCATTT CCTCGCAAAA TGTAAACGGT GGCGTGAGTC CGTTTAGCTT GCAGATGTTC
GGACCCATTA AGTCTATCGT TATACTGAAA GATGCAGAAG CCACCGCCAT TTACGGAGCC
CGTGGCGCCA ATGGCGTAAT ACTGATAGAA ACCTTTCGTG GAAAACCGGG AAGAACCACC
TTCGATGTTG ATTTAGTATA CGGCGTGGGC CGTGTAGCGA GAAAATACAA CTTGCTGGAT
ACGCAAGAGT ATCTTACTAT GAGAAAGGTG GCCTTCCGTA ATGACGGGCT AACCCCCAGC
AACATTCCCA CCGATAAAGG ATACTCACCC GATCAAACGC TGTGGGACCC TAACCTGTAT
TCCAACTGGC AGAAGGAGCT GATAGGTAAA AACGCCCGAA CCACTGAGGC CGATATTGCC
GTTACCATGG GTAATCGGAA TCTTCAAACC CGTATCGGAG GTGGTTTCCT CAAACAAACC
ACTGTGTTTT CGGCTAATCA GTATTATCAA CGCACCAACG TTAACGTTGT TACAGACTAT
TCCACCAATG ACATGAACTT CCAATTTCGG TCTTCTATGG GCTATTCCTA CGACTTCAGC
CAATCCTTCA CCGGATCACT AATAGGCGTG CTCACTCCGC CCAATGCTCC CGGCAACCTT
GGTGACAACA ACGAACTGAT TTGGGAGCCG GGGATCAACC ACCCGCGGGC TGATTTTCTA
AAAACCTATT CTTTTGCCAA AAGAAACTTC CTTTTCAGCA ACATAGTTAA ATGGCGGCCC
CTTTCCAACG TGCTGATCAA AACCACCGCT GGTTTAAGTG GCCTGGCCAC CAACGAAGCC
GATCAATTGC CTATCGCCAG TCAGAACCCG TGGTCCGTAG CCAACAGGGA GGGCAGCTAT
ACGCTTGCAA AGAGGAGCAT ACTGGGTTAC ATTGTTGAAC CGGTAATGGA ATACTATCCC
CGTTTTATAC CAGGCGATAT TACCCTGCTT ATCGGCGCTT CCTTTCAAAA GATCACCAGC
AAAAGCACTT TATTCTCAGG AGACGGATAT ACCAGCGACG CCGACCTGAT AACAATGGAA
AACGCTCCCC ACAACTACCT CAATATCCAT AACCGGTCTC AATATGTATA CGGCTCCCTG
TTTACCCAGA TAAGATACCA AAGCAAGAAA AAATACCTGG CCAGCTTTAC CTACAGGAGC
GATGTAAGCA GCAGGTTTAG TCCGCTGCGC AACACAGGAA GCTTTCTGTC ACTTGGCGGC
GCATGGATCT TCTCTGAAGA ACCACTGTTA AAACACAACA ACTCTAAGCT GCTCTATGGT
AAACTTCGTG GTAGTATAGG GATCACTGGT AGTGACGACA TAGACGATAA CCAGAACCAG
GCCGTATGGG CCGGCAATGG GGGCGACAAC CCTTACCAGG GGGTGAATGG CATCAGTCCG
CAGGATCCCT TCAACTCCCG CGCTACCTGG CAATTATCAC TAAAAAAAGA GCTGGGGCTT
GACCTGCGAT TTTTCAAGGG CCGCTTACAA TCCACCTTTT CCTACTACCA CAACAAAAGC
TACAATCAGC TATTGAAGTC AGAGCTACCT GCCCAGGCGG GCTTTCCCGA TATGCTGCGT
AATACCGATG CCAAGGTGCT CAACTCCGGC ATAGAGGTGG AAATAGGAGG CGACATCATT
CAACGCGACG AAACCAGTTT GCATATAGCT GCCAACTTCG CCCGGCCGCG TAATAAAGTG
CTTTCCATTG CCAACGCCGA CCGGCAGACC AGCACCCTCT TTCAGGTAGG CCAGCCCATA
ACGGGGCTTA ATAAATTCAA GTCAACCGGT GTGTCTTCGG CTAACGGCCT TTACCAGTTC
GTCGATAGAG ACGGCAACGG GATTTACAAT GTGGCAGACT ATCAGCCCAT AGGCTCACTC
GATCCTGTAC TGCTTGCCGG CTTGTCTATT CAATACCGCT GGAAAAGTAT TACGCTCAGT
GCGCGGTTCG ATTACAGGAA GCAGATGGCG CCATCTTACG TCTACTCCAT GCAACTGTCA
GACAGATATC TGGGAGGCCT TACCAACCAT ATAGTAGCAA CACTTGACTA CTGGAAAAAC
CCCGGCGACC AGGCCACTTA TCAAAAGCCC TCCGCACTTT CTTCCAGTGA AGCCAACAGC
ACCAAGACCA TGATCATCAA CTCCAGCGAA GCATTTACCG CCAGCGACTA CCTCAAATGC
CGGGAAATGT CGTTCACCTA CGTGGTAAGC GAAAAGATAG CCAAACGGGT ACATTGCCAG
CACCTGAGCG TTTTTATAAG AGGGCAGAAC CTGTTTACCA TTAGTCCGTA CAAAGCCGGA
GATCCTGAAA CAGCCAATGT GCTTTCGCTT GGTACGCTTA CCACTTTCAC CGGAGGCATT
CATTTAACAC TCTAA
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| Protein sequence | MGRFLCHKGV YLFVLTIFVH VAGLFAQGKD IPPLQRKVTL VLKNGTLLDV KKAVKEQTNV
EITGRFDLTA GGFTVDAHGV TVPQLLKESF TPKGYTWELR DSMVVLREPT KKDSSITSAE
LPLQPTTLTG LVTDTTGEAL PGATVRVYGQ NRGVSTNHAG RFTLPISKAD TLLDISFIGY
EKQRLLLSPN QRFIAVQLHF ADKRLDDVFV SGMSEASERS TIGSIDHLDF TYIQSLGNDN
AVTNLQGAVP NLLVEQTSGV PNSTVSVQLR GRSSFTGRAG PLYVINGIPY AGNLSTINLR
PSISSQNVNG GVSPFSLQMF GPIKSIVILK DAEATAIYGA RGANGVILIE TFRGKPGRTT
FDVDLVYGVG RVARKYNLLD TQEYLTMRKV AFRNDGLTPS NIPTDKGYSP DQTLWDPNLY
SNWQKELIGK NARTTEADIA VTMGNRNLQT RIGGGFLKQT TVFSANQYYQ RTNVNVVTDY
STNDMNFQFR SSMGYSYDFS QSFTGSLIGV LTPPNAPGNL GDNNELIWEP GINHPRADFL
KTYSFAKRNF LFSNIVKWRP LSNVLIKTTA GLSGLATNEA DQLPIASQNP WSVANREGSY
TLAKRSILGY IVEPVMEYYP RFIPGDITLL IGASFQKITS KSTLFSGDGY TSDADLITME
NAPHNYLNIH NRSQYVYGSL FTQIRYQSKK KYLASFTYRS DVSSRFSPLR NTGSFLSLGG
AWIFSEEPLL KHNNSKLLYG KLRGSIGITG SDDIDDNQNQ AVWAGNGGDN PYQGVNGISP
QDPFNSRATW QLSLKKELGL DLRFFKGRLQ STFSYYHNKS YNQLLKSELP AQAGFPDMLR
NTDAKVLNSG IEVEIGGDII QRDETSLHIA ANFARPRNKV LSIANADRQT STLFQVGQPI
TGLNKFKSTG VSSANGLYQF VDRDGNGIYN VADYQPIGSL DPVLLAGLSI QYRWKSITLS
ARFDYRKQMA PSYVYSMQLS DRYLGGLTNH IVATLDYWKN PGDQATYQKP SALSSSEANS
TKTMIINSSE AFTASDYLKC REMSFTYVVS EKIAKRVHCQ HLSVFIRGQN LFTISPYKAG
DPETANVLSL GTLTTFTGGI HLTL
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