| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3195 |
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| Symbol | |
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| ID | 8359360 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 3941735 |
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| End bp | 3943153 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644965367 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003122863 |
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| Protein GI | 256422210 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.803045 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.231772 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGATTTA CTAGCATAAG ACTGTCTGCG CTTTCTTTCA TCATAGCTTC TCTATTTGTC
TCTTGTAAAA AATTCCTGGA TGTTGGTTAT CCTCCGGATA AGATTGTTCC CGAATATATC
TATTCTTCTA ATAAATCGGC AGCTAACGTA CTCACGGGTT TATATTATGA TATGCAGCTT
GGTGGCAGCC TTGCACACGG CCGCTATAGC TTTTCAGTTC AACTGGGTTT GCAGGCAGAT
GAAATTGCCG CTTTACCCGG TAGTTTCTTA AACGGTCAGT ACCGGAATAT TTTTCGCTAT
GATTTCTGGA CGACCCTTTA TAAGCTTATT TATCGTGCCA ATGCCGCTTT AGAAGGACTA
ACGGCTTCTA CTTCTCTATC ACCTGATGTT AAAAACCAGC TATTAGGAGA GGCTTATTTC
TTAAGGGCCT TTTATTACTT CTATCTGGTG AATTTATATG GTGATGTTCC TTTAATTCTT
AATTCTGATT ATAAAAGTAA TAGTAATGCT TCGCGAACAC CCATGGCCGA TGTTTATAAT
AAAATGGTGG GCGATTTGAA ATTAGCGGAG CAGTTGTTAT CGGATAACTA CCTGGCACCG
AACGCCGCTT CCGTGGTAGA CGATAGGCTG CGCCCTACCA AAGCCGTCGC TACTGCAATG
TTAGCAAGGG TTTACCTGTA TCAGAAGAAC TGGAAGGATG CCGCTGCGGA AGCGAGTAAA
GTTATCGATA ATAAAGCAGT ATACGATACC GTGGCGCTTG ATCAGGTTTT CTTAATGAAC
AGCAAGGAGG CTATCTGGCA GTTGCAGCCA AATTATGAAG AAGGCACCTT TAATAATACA
CTGGATGCTG ATGTGTTTGT TTTGATCAAC GGCCCGAACC CTTTTCAAAA ACCGGTGGTG
GTAGCTGACT TTTTACTGGA AGCGTTTGAA AAAGGTGATC AGAGAAGGCA GCATTGGATA
GGTGTTAACC ATGCTAGTAA CGGAACCACT TACTATTACC CTTTTAAGTA TAAAGTTTAT
GAGCCGGATG TGGACCGTGC GGAGTATATC ATGGTGATGC GTTTGGCGGA GCAATACCTG
ATCAGGGCTG AGGCTAGAGC TGAATTGAAT GATATAAAGG GGGCACAGGA TGATCTTAAT
ACCGTACGTT CCAGGGCCGG ATTGCCTGAT ACCGACGCAT CGGACAAAAC AGCATTGGTG
AAAGCGATTT TACATGAGCG TCAAATAGAG CTGTTTTCAG AATGGGGCCA TCGCTGGTTG
GATCTTAAGC GCACTGGTAC GGTGGACGAT GTAATGGGAA AGATCACCCC GCTTAAAGGC
GGCACCTGGG AAAGTTATAA ACAGCTTTTT GATATTCCAG TATCGGAGTT TAAGTACAAT
GGAAATCTGG TGCAGAATAC TGGCTATCCA TCCCGGTAG
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| Protein sequence | MRFTSIRLSA LSFIIASLFV SCKKFLDVGY PPDKIVPEYI YSSNKSAANV LTGLYYDMQL
GGSLAHGRYS FSVQLGLQAD EIAALPGSFL NGQYRNIFRY DFWTTLYKLI YRANAALEGL
TASTSLSPDV KNQLLGEAYF LRAFYYFYLV NLYGDVPLIL NSDYKSNSNA SRTPMADVYN
KMVGDLKLAE QLLSDNYLAP NAASVVDDRL RPTKAVATAM LARVYLYQKN WKDAAAEASK
VIDNKAVYDT VALDQVFLMN SKEAIWQLQP NYEEGTFNNT LDADVFVLIN GPNPFQKPVV
VADFLLEAFE KGDQRRQHWI GVNHASNGTT YYYPFKYKVY EPDVDRAEYI MVMRLAEQYL
IRAEARAELN DIKGAQDDLN TVRSRAGLPD TDASDKTALV KAILHERQIE LFSEWGHRWL
DLKRTGTVDD VMGKITPLKG GTWESYKQLF DIPVSEFKYN GNLVQNTGYP SR
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