| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2901 |
|---|
| Symbol | |
|---|
| ID | 8359062 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 3580965 |
|---|
| End bp | 3581273 |
|---|
| Gene Length | 309 bp |
|---|
| Protein Length | 102 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 644965081 |
|---|
| Product | RNP-1 like RNA-binding protein |
|---|
| Protein accession | YP_003122581 |
|---|
| Protein GI | 256421928 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0724] RNA-binding proteins (RRM domain) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAATATTT TTGTAGGTAA TATAAGTGAC AGAACAACTG AAGATGAAAT CTGGTCTTTA
TTTGACCCAT TTGGAGTTGT ATATAGTATT AATGTGGCTT ATGATAAGTA CAGTGGCCGT
TCTAAAGGTT TTGCATTCGT TGAAATGCCA GACGATTCCA ATGCAGTACT GGCAATTAAG
GAATTGAATA ATTCTGTAGT TGATGGCCAG AAAATAGTAG TGTATGAGGC TCGTCCAAAA
CCTGAAAGAC CGGAAAATAA TCGTTTCTCA AGATCCGGAC CACGCCCTGG ATTTAGACCC
AGATACTAA
|
|---|
| Protein sequence | MNIFVGNISD RTTEDEIWSL FDPFGVVYSI NVAYDKYSGR SKGFAFVEMP DDSNAVLAIK
ELNNSVVDGQ KIVVYEARPK PERPENNRFS RSGPRPGFRP RY
|
|---|
| |